KEGG   Thalassiosira pseudonana: THAPSDRAFT_34441
Entry
THAPSDRAFT_34441  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K06874  zinc finger protein ZPR1
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tps03041]
    THAPSDRAFT_34441
Spliceosome [BR:tps03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    THAPSDRAFT_34441
SSDB
Motif
Pfam: jr-ZPR1 Zn_ribbon_ZPR1
Other DBs
NCBI-GeneID: 7450090
NCBI-ProteinID: XP_002290723
JGI: 34441
UniProt: B8C307
LinkDB
Position
5:complement(1311219..1312676)
AA seq 460 aa
CPNCQSPNAPTTILPTNTLHESVIMSLTCPDGNFHDIQINIGGTIQPRGQRTVITVSSRR
DLDRQIVKSDSATVFLPSVDDFEIPQHTQVGVCTIEGLLRQAACNLEKWQAERLRLGDVD
NFHRFNLHNNYMPFNLILDDAAGNSFIENPYAPSSDPNTTTEEYIRTPAQDIELGLQAST
EDEDVGELRGQHSVDIDECILSSLSIQSKSNNSQQSSTTELGRDEVMKFPTNCPSCNASS
ETDICVIAIPHFKEVIIMCLFCEQCGYKSSEIKGGGAIPSVGTRTTLQVDRADDLAREVL
KSDTAGISIPELDLELNEGGLDGVYTTVEGLLMKMHDRLKEVNPFGVGDTSVKHHANNDD
REFSDPLPRHARFVQFLSRLKAMAEGRVLPFVLVISDPLSNSFIGPIPEVATRLALQAEK
EGSLTCYETFVDEGLSAEEYERTDEQNVNLGLSDMITEHY
NT seq 1380 nt   +upstreamnt  +downstreamnt
tgcccaaactgccaatctccaaacgcaccaaccaccattctacccactaacacgcttcat
gaaagcgtcatcatgtcactaacttgtccagacggcaactttcacgatatccaaatcaat
attggtggaacgatccaaccacggggacaacgaacagtaatcactgtttcctctcgtcga
gatttggatagacagattgtcaagtcggattcagcaacagtatttctcccttcggtggat
gattttgagataccgcagcatacgcaagtgggtgtatgtacaattgaagggttgttgcga
caggcagcttgtaatttggagaagtggcaggctgaacgattgaggttgggggacgtggat
aacttccatagattcaacctgcacaacaactacatgccattcaatctgatattggatgat
gcagcaggcaactcattcattgagaacccttacgctccttcgtctgatccaaacacaact
actgaggagtacattcggacaccagcacaagatatagaacttggattacaagcctccaca
gaggacgaagatgtaggagaattgagaggacaacattctgttgacatcgacgagtgcatc
ctttcttccttgagtatccaaagcaaaagcaataattcacaacagtcttcaacaactgag
cttggccgagatgaagtcatgaagtttccaaccaattgccctagttgcaatgcatcatca
gaaacagacatatgcgtcattgcgatacctcatttcaaagaagtgatcataatgtgttta
ttctgtgagcaatgcggctacaaatccagtgaaatcaaaggcgggggggcgattccgtcc
gtcggaacgagaaccacactgcaagttgatagggcagatgacttggccagagaggttctc
aaaagtgatactgctggtatatcaatccctgaacttgacttggagttgaacgaaggtggg
ttggatggagtgtatacgacggtagaaggattgctgatgaagatgcacgatagactcaag
gaggtcaatccgttcggtgttggggatacatctgtaaagcatcatgccaacaacgacgat
cgtgagtttagtgatccacttcctcgacatgcacgttttgtgcagttcttgagtcgttta
aaggccatggcagaaggaagagtgcttccatttgtcttggttatttcggatccactttcc
aactcgttcattggaccaatacccgaagttgcgacgagacttgcattgcaggcagaaaag
gaaggatccttgacatgctacgaaacgtttgtcgatgaaggattgtccgccgaggagtac
gagagaactgatgagcagaatgtaaatctcggcttgagtgatatgataacagaacactat

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