Thalassiosira pseudonana: THAPSDRAFT_34505
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Entry
THAPSDRAFT_34505 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K18460
exportin-7
Organism
tps
Thalassiosira pseudonana
Pathway
tps03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
THAPSDRAFT_34505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tps03019
]
THAPSDRAFT_34505
Messenger RNA biogenesis [BR:
tps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
THAPSDRAFT_34505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_XPO7
IBN_N
DUF1319
Motif
Other DBs
NCBI-GeneID:
7449660
NCBI-ProteinID:
XP_002290539
JGI:
34505
UniProt:
B8C1X0
LinkDB
All DBs
Position
5:complement(<323001..>326635)
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AA seq
1066 aa
AA seq
DB search
MDDSQLAQVEALCETLYTGQSVASSNSDPITREEAQSRLLSLQSSANFIPQCQYILDRSQ
SQYALLVASNSLTELITTHWNNFTIAQRIDIRNYVLGYLANNGPTLQDFVTLSLIKLVCR
ITKLGWFDDSTHRELTEDVTKFLQATIDHCILGLKLLNQLVDELNIPTTGRTLTQHRKTS
VSFRDLCLFKVFQLGLTTLQQLQSRAISDPQQEVIMGEQALSLTVRCLNFDFIGTNPDES
TEDVGTIQAPSAWRPVLQDPGTTELLLDFYANTDPPRSSKAMEAVILLCSVRRSLFPSDK
EREAFLGRVMAGIRELLKNQTGLQHQDNYHQFCRLLGRLKANYQLSELVKTEGYLEWLEL
AASFTTQSIRNWQYSTNSIHYLLALWGRLVSAVPYVRPDAGNKGHVQALQTHVLAVVDCY
IEGMLGSVEAVLRSDGALEDPLEDDGSLMEQMDRLPTICRFQYNSVATIIIAKFDPLLTK
YRELMGHLVSSSTESAPPNVAQQVAILEGQLTWLTYIIGAIVGGHSWSSSRVGDGDETLD
ASLSKRADSKLEVALLYYFQNFRRVYMFMWEQQKVYQNMFEHMGLGDHTVVANLIVTKIG
KNLKFWPDEHDIISKTLELLTDMAGGYSSSKLLLTLDTVKYLASHHTHEEFPFLNVPSNA
RHRTTFHAILVRLLLSPNGDEKLGLNFDQFMESIVKVMTQLESLDLSQLRSEAARMPLVG
VFRDLRGVAQSLHNRRTFGMLFDILEPRHMPLFSKVADLWYDQPDVIISLLRFMQEFCHN
KANRVNFDQSSPNGILLFRSTSDVVCAFGRKILATPNPTAGDVYKMKYKGMSLALSVMNS
ALGGNYVCFGVFALYSDPALENALDICLKMALSIPLEQVIAYPKLSKSVFGFIEIMFRNH
NKTTMALETGVFMQLMNAVHEGLQSSDAQISSMCANSIDHLATFFYENSGKDKPEVHNLN
KHLAAQPNLFSSLTATLFNLLLFGAPQNHWAVMRPMLSLMLASESSFTAYKDHLMGTQDA
ANQALLNEAFNKLLADVSRSLESANRDRFTQKLTAFRVSTRGFLTL
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggacgactcccaactagcccaagtagaagccctctgcgaaacactctacaccggccaa
tccgtcgcctcctccaattccgacccaatcacccgagaagaagcccaatcccgcctcctc
tccctccaatcgtccgccaacttcatcccccaatgtcaatacatcctcgaccgctcccaa
tcccaatacgcactcctcgtagcatccaacagtctcaccgagttgattaccacccactgg
aataatttcacgattgctcaacggattgatattcggaattatgttttgggatatctggct
aataatggaccgactctccaagattttgtcaccttgtcgttgatcaaattagtctgccgt
attaccaaactgggatggttcgatgattcgacccacagagaactcaccgaagatgtgacc
aagttcctccaagcgacgattgaccattgtatattggggttgaagctattgaatcagttg
gtagacgagttgaatattcctactacggggaggacgttgacgcagcataggaagacgagt
gttagttttagggatttgtgcttatttaaggtgtttcagttggggttgactacgttgcag
cagttgcagagtcgggctattagtgaccctcaacaagaagtaatcatgggagaacaagct
ctctccctcaccgtccgttgtctcaactttgacttcatcggaacaaaccccgatgaatcc
accgaggatgtgggtaccatccaagctccctccgcatggagacccgtccttcaagatccg
gggactacggaactattgcttgatttctatgccaatacggatcctccgcgatcgagtaag
gcgatggaggcggtgatattgttatgttcggtgaggagatcgttgtttccatcggataag
gagagggaggcttttttgggaagagtcatggctgggattcgggagctgctaaaaaatcag
acagggttgcagcatcaggacaattaccatcagttttgtcgattgttggggaggctcaag
gccaattatcaattgagtgagttggtcaagacggaggggtatttggagtggttggagttg
gctgcctcattcactactcagtcaattcggaactggcagtacagtaccaactcaattcat
tacttgttggcgttgtggggacggttagtgtctgcggtaccgtatgtgaggcctgatgcg
gggaataagggacatgtgcaggctttgcaaacgcatgtgttggctgttgtggattgttac
atcgagggcatgctgggatcagttgaagccgtcttgagaagtgatggggcattagaagat
ccattggaggacgatggatctctcatggagcaaatggatcggttgccaacaatctgcaga
ttccagtacaactctgttgcgacgataatcattgccaagttcgatccgttgttgaccaaa
tatcgagaactcatggggcatctcgtgtcatctagcacggagagtgctccccccaacgtg
gcacagcaggtggcaattttggagggacaattgacgtggctgacatacattatcggggcg
attgtcggagggcacagctggtcatcgtctcgtgttggtgacggcgacgaaactttagat
gctagcctgagcaagagggctgactcaaagctggaagtggccttgctgtattactttcag
aactttagacgagtgtacatgttcatgtgggagcagcaaaaagtataccagaacatgttt
gagcacatgggcttgggggatcataccgtcgttgcaaacctcattgtgacgaagatcggg
aagaacctcaaattctggccagacgagcacgatatcatttcaaagactctggagcttctt
actgatatggcggggggatacagcagctccaaattacttctgacactggatactgtcaaa
tatcttgctagccatcatactcacgaggagtttccgttcctcaatgttccatcaaacgcg
agacaccgaacaacattccatgccattcttgtcagattgcttctgtcgccaaatggtgat
gaaaagcttggattgaacttcgaccagtttatggagtcaattgtgaaagtcatgacgcag
cttgaatcattggacttgtctcaactgcggagcgaggctgccaggatgccattggttggt
gtgtttcgagatctgaggggcgttgctcagagtctacataaccgtcgaacatttggaatg
ctatttgatatccttgagccacgtcacatgcctctattctccaaagttgctgatttgtgg
tatgatcaaccggacgtgattatcagcttgcttcggtttatgcaggagttctgccacaac
aaagccaaccgtgtcaactttgatcagagcagtcccaatggcatcttgcttttcagatct
accagtgacgtcgtttgtgctttcgggcgtaagatactggcgacgcctaacccaactgct
ggagatgtgtacaaaatgaagtacaaaggaatgtcgcttgcacttagcgtgatgaattcg
gctctcggagggaactacgtctgcttcggtgtctttgccttgtacagtgacccagcgttg
gagaatgctttggatatctgtttgaagatggctctcagtattccgttggagcaagtcatt
gcgtatcccaagttgagcaaatcagtatttggtttcatcgaaatcatgttccgcaatcac
aacaaaacaaccatggctttggaaacaggtgttttcatgcagttgatgaacgctgttcat
gagggattgcagtcaagtgatgcccaaattagctccatgtgtgccaatagcattgatcat
ttggccacgttcttctacgagaatagcggcaaagacaaacccgaagtgcacaatctcaac
aagcatctggccgcccaacccaatctattctccagtctcacggctacactgttcaacttg
ctgttgtttggagcaccacaaaaccattgggcagtgatgcgtcctatgctgagcctcatg
ctggcgagtgagtctagctttacagcttacaaagaccatttaatgggtacgcaggatgca
gccaaccaggctctactgaacgaggcattcaacaaattgctcgctgacgtgagccgtagc
ttggagagtgccaaccgtgatcgttttacacaaaagcttactgcattccgagtgtctaca
cgtggcttccttacgttgtaa
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