KEGG   Thalassiosira pseudonana: THAPSDRAFT_34620
Entry
THAPSDRAFT_34620  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K17917  sorting nexin-1/2
Organism
tps  Thalassiosira pseudonana
Pathway
tps04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    THAPSDRAFT_34620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tps04131]
    THAPSDRAFT_34620
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:tps04990]
    THAPSDRAFT_34620
Membrane trafficking [BR:tps04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    THAPSDRAFT_34620
Domain-containing proteins not elsewhere classified [BR:tps04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   THAPSDRAFT_34620
SSDB
Motif
Pfam: PX Vps5 LXN
Other DBs
NCBI-GeneID: 7442335
NCBI-ProteinID: XP_002291311
JGI: 34620
UniProt: B8C4Z2
LinkDB
Position
6:complement(187325..188740)
AA seq 381 aa
MNTLSHPEDSIDYITVSDPVIHADGMNKYTSYRVDCPADYPFLQNNQSPSSVLRRYSDFL
WLYERLQKERAGSIVPPIPEKQAVSRFSPEFVEERRGALERFLRRVVIHPELQDTSCLQT
FLRADDLSFQHAKSLSEKLDSSQHNGLDMSASLGGAGAFNLTPKNAAGIKKYIEALAIQM
KRVSNQASGLVKKSREIANGLFEFGLAFHQLGQSEGEVLGSKLQLVGGTAETLSGMAANQ
ADQELKRLGEPFRDYLKIIQAVKLALGRRHDKRVSYTALLHEIQTREINLHRLRMTPGSE
GKAYSIEMSLQRYQAAAEVAREEYAECSQRVLREVDRFKREKAEEMKLVVLNFIMLEIEV
NRNMERVWGELVPKLEGDNGV
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgaacaccctctcccaccccgaagactcaatagactacatcaccgtgtccgatccagtc
atccacgccgatggtatgaacaagtacacttcgtacagagtggattgcccagcagactac
ccattcctgcaaaacaatcaatccccatcctcggtgctacgacgctactctgactttcta
tggttgtacgaacgtcttcagaaggaaagggcggggagtattgtgcccccgattccagag
aaacaggccgtgagtcggtttagtccggagttcgtggaggagagacggggcgctctagaa
agattcctccgaagagtcgtcatccacccagaactccaggacacctcctgtctccagacc
ttcctccgagccgacgacctctccttccaacatgcgaaatctctctctgaaaagctagac
tcttctcaacataatggattggacatgtcggcatctctagggggagcgggggcattcaat
ctaactcccaagaatgctgcggggattaaaaagtatattgaagcgttggcgatacagatg
aagcgggtgtcgaatcaggcttcgggattagtaaaaaagtctagagagattgccaatgga
ttgtttgagtttggattggcgtttcatcaactcggtcagagtgagggagaagtactgggg
agtaagctgcaattggtgggagggacagcggagactctgtcgggaatggcggcgaatcag
gcggatcaagagctgaaacggttgggagagccttttagagactatctcaagattatccag
gcagtcaagttggcattgggcagaaggcatgataaaagagtttcgtacacggcgttgttg
catgagattcagacacgagagataaacttgcatcgattgagaatgactcctggatcggag
gggaaggcatactctatagagatgtccttgcagcgataccaagcagctgccgaggtggct
cgtgaggagtatgcagagtgttctcaacgtgtattacgtgaggtagatcgtttcaagagg
gagaaggccgaggagatgaagctggttgtgttaaatttcatcatgttggagattgaggtg
aataggaatatggaacgtgtttggggggagttggtaccgaagttggagggagataatgga
gtg

DBGET integrated database retrieval system