KEGG   Thalassiosira pseudonana: THAPSDRAFT_34701
Entry
THAPSDRAFT_34701  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K08336  ubiquitin-like protein ATG12
Organism
tps  Thalassiosira pseudonana
Pathway
tps04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:tps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    THAPSDRAFT_34701
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tps04131]
    THAPSDRAFT_34701
   04121 Ubiquitin system [BR:tps04121]
    THAPSDRAFT_34701
   03029 Mitochondrial biogenesis [BR:tps03029]
    THAPSDRAFT_34701
Membrane trafficking [BR:tps04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    THAPSDRAFT_34701
Ubiquitin system [BR:tps04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   THAPSDRAFT_34701
Mitochondrial biogenesis [BR:tps03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    THAPSDRAFT_34701
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 7446557
NCBI-ProteinID: XP_002291258
JGI: 34701
UniProt: B8C4Q5
LinkDB
Position
6:1937050..1937412
AA seq 91 aa
KSTSRVKVHFVAVGSAPILKKSKFLIGEEDEFGVATAFLRRLLRLDSAPSLFLYINAAFV
PSPDERIGDLYDCFGVRGELVVHYSLQEAWG
NT seq 276 nt   +upstreamnt  +downstreamnt
aaatcaacatccagggtaaaagtgcactttgtagcagtgggaagtgcacccattctcaag
aagagcaagtttctcattggagaagaggatgagtttggagtggccactgcttttttaaga
cggttgttgagacttgatagtgcaccatctctctttctgtacattaatgcagcgtttgtt
ccaagtccagatgaacgtattggtgatctgtacgattgttttggtgtgagaggagagctg
gtggttcattacagtttgcaggaggcgtgggggtag

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