Thalassiosira pseudonana: THAPSDRAFT_34810
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Entry
THAPSDRAFT_34810 CDS
T01078
Name
(RefSeq) calreticulin-like protein
KO
K08057
calreticulin
Organism
tps
Thalassiosira pseudonana
Pathway
tps04141
Protein processing in endoplasmic reticulum
tps04145
Phagosome
tps04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
THAPSDRAFT_34810
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
THAPSDRAFT_34810
04148 Efferocytosis
THAPSDRAFT_34810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tps03110
]
THAPSDRAFT_34810
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tps04091
]
THAPSDRAFT_34810
Chaperones and folding catalysts [BR:
tps03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
THAPSDRAFT_34810
Lectins [BR:
tps04091
]
L-type lectins
THAPSDRAFT_34810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Fungal_TACC
Motif
Other DBs
NCBI-GeneID:
7442786
NCBI-ProteinID:
XP_002291609
JGI:
34810
UniProt:
B8C4G1
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Position
6:complement(1696574..1698010)
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AA seq
376 aa
AA seq
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MKFAAVLASVLMAPSAAEIYFKEQFNDDAWKDRWTIASDWKSSSELGEWSHTAGDWHGDA
QDKGIKTSTDARFYGLSAPLSKTFNSSDKKDLVIQYSVKHEQKIDCGGAYLKLLPGGDKF
EAKKFGGDTPYGVMFGPDICGSSNKRTHVIFHYDKKDENLLIKKNVGCEDNQLSHLYTLV
LRPDNTFEVFVDNKSVRSGKLEDEFDFLPDEKIKDPNESKPADWVEEKKIPDPEDVKPEG
YDEIPAEIPDPDAAKPDDWDDEDDGEWEPPMVDNPEYKGPWKPKMIDNPDYKGPWVHPMI
PNPEYEYDENMYAVCKDGCTHVGFELWQVKAGTLFDDIIVTDSLEEAQKFAEETFFKKKD
AEKEMFDAAQKKDREE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgccgccgtactcgcctctgtgctcatggcaccctctgctgccgagatttac
ttcaaagaacagttcaatgatgatgcgtggaaagaccgatggacaatcgcatccgactgg
aaatcctcctccgaactaggcgaatggtcccataccgccggagactggcacggcgacgcc
caagacaagggcatcaaaacctccaccgacgcacgattctacggtctctccgcccctctc
tccaagacgttcaactcatccgataagaaggatttggtcattcaatattcggtcaagcat
gagcaaaagattgattgtggtggggcgtatttgaagttgttgcctgggggtgataagttt
gaggccaagaagtttggaggggatactccctacggtgtcatgtttggacctgatatttgt
ggatcttccaacaagcgtacgcacgtcatctttcattatgataagaaggatgaaaatctt
ctcatcaagaagaatgtgggatgtgaggacaatcaactttcccacctttatactctcgtc
cttcgtccggacaacacctttgaagtctttgtagacaacaagtcggtacgatctggaaag
cttgaggatgagtttgacttcctccccgacgaaaagattaaggatcccaacgaatcaaag
cctgctgattgggtggaggagaagaagattcctgatccggaggatgtgaagcctgaggga
tacgatgaaattcctgctgagattcctgatccggatgctgccaaaccagatgattgggat
gatgaagacgacggtgaatgggagccccccatggttgacaaccctgaatacaaaggacct
tggaagccaaaaatgattgacaaccccgactacaaaggaccctgggttcatccaatgatt
cccaaccctgaatatgagtacgatgaaaatatgtacgctgtgtgcaaagatggatgtacc
catgttggattcgagctatggcaagtcaaggctggaactctatttgatgacattatcgtt
acggatagtttggaggaggcacaaaagtttgcggaggagacgttctttaagaagaaggat
gcggagaaggagatgtttgatgctgctcagaagaaggatagagaagag
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