Thalassiosira pseudonana: THAPSDRAFT_34850
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Entry
THAPSDRAFT_34850 CDS
T01078
Name
(RefSeq) atp-dependent serine protease
KO
K08675
ATP-dependent Lon protease [EC:
3.4.21.53
]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tps01002
]
THAPSDRAFT_34850
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tps03029
]
THAPSDRAFT_34850
Enzymes [BR:
tps01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.53 endopeptidase La
THAPSDRAFT_34850
Peptidases and inhibitors [BR:
tps01002
]
Serine peptidases
Family S16: lon protease family
THAPSDRAFT_34850
Mitochondrial biogenesis [BR:
tps03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
THAPSDRAFT_34850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lon_C
LON_substr_bdg
AAA
Lon_lid
AAA_5
AAA_2
ChlI
AAA_PrkA
bpMoxR
AAA_22
RuvB_N
AAA_16
TIP49
nSTAND3
AAA_18
NPHP3_N
NTPase_1
AAA_28
AAA_19
AAA_30
AAA_14
RNA_helicase
AAA_24
Cytidylate_kin
TsaE
AAA_3
AAA_17
Med28
AAA_25
Motif
Other DBs
NCBI-GeneID:
7445979
NCBI-ProteinID:
XP_002291491
JGI:
34850
UniProt:
B8C600
LinkDB
All DBs
Position
6:complement(1097521..1100289)
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AA seq
837 aa
AA seq
DB search
LGFGDQAPRYPHLMALPVTRGPVFPGVLTPITITDQKTIKAVEKILSGGSGGYLGLFLRK
DTDVTKGLDKPEIITNASDLYNVGTFAQIQRMTKNDNKHHLHKPSASILLMPHRRIDLLS
VDDVGPPVDVTVSHWDRLKYVRGEDSSRDDTIRALCQEVLSTIREVAQLNTLFKEQVVNL
VPSSHMFDMNDPYRLADFAASLSSLGDMEDLQGVLEEKDPELRLHKALVLLSKEREVGKL
QKEISAKVEEKMSEAQRKYFLTEQLKSIKKELGMEKDDKESLIEKYRKKLAEYPSIPEEI
SETIESELDKLSTLEKNSSEFNVTRSYLDWLTNIPWGVTTKENFDISDARTVLDRDHYGM
DEVKETILQFIAVGKLKGSVQGKILCLAGPPGTGKTSIAESVAEALGRKFFRFSVGGMSD
VSEIKGHRRTYVGAMPGKIIQCLKSTGSSNPLVLIDEIDKLGRDFRGDPASALLEVLDPS
QNSTFRDHFIDAPVDISKVLFMCTANELDAIPGPLLDRMEVIRLSGYDVPEKLEIAQQYL
VPKSMVNSGLMVKEIHEDDSTEKDNALESLVRWYCREAGVRNLAKKIDKITRLLSLQVVA
EEEGAMLTDKSTRKSDTWEVSSDNLHEYVGKPIFTSDRLYDTDPLPHGIVMGLAWTSMGG
SALYIETQGIKRGLDTEGKRRGGGTLKTTGQMGDVMKESTQIAYTVARARMAEIAPDNSF
FDDTDIHMHVPEGATPKDGPSAGVTMVTAMLSLALDRPIKSDLAMTGEISLTGKVLAVGG
IKEKTMAARRAGISTIILPEDCRRDFEELPDYLKEGLDVHFATEYSDVYDVAFGKSC
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
cttggattcggtgatcaggcaccgagatatcctcatttgatggcacttccagttacaaga
ggaccagtgtttcctggtgttttgacgccaattacaatcactgatcagaaaacaatcaaa
gcagtggagaagattctctctggcggtagtggaggatatcttggcttgtttctacgaaag
gatactgatgttacaaaaggattggataagccagagataatcacaaatgcatcggacttg
tacaatgttggaacgttcgctcagatccaaagaatgacaaagaatgacaacaagcaccat
ttacacaaaccatctgcatcaattctcctcatgcctcatcgacgtatcgatttactttcg
gttgacgatgttggacccccagttgatgttactgtatctcattgggatcgcttgaaatat
gtccgtggcgaagactcttctcgcgatgacacgattcgtgcattgtgtcaggaggtattg
agtactatccgtgaagtcgctcaactcaatacattattcaaagagcaagttgtcaacctt
gtgccgtcgtcgcatatgtttgacatgaacgatccgtaccgactggctgattttgcagct
tcattgagcagtctaggagacatggaggatctgcaaggagtattggaagagaaggatccc
gagttgagattgcacaaagcactagtgttgttatcaaaggaaagagaagtcggaaagttg
cagaaggagatcagtgccaaagttgaagagaagatgagcgaagcacagaggaagtatttt
cttactgaacaactcaaaagcatcaagaaggagctcggtatggaaaaggacgataaggag
tcacttattgagaagtacaggaagaaactagcagagtacccatccattccagaggagatc
tctgaaacgattgagtcagagctagacaaactatcgacgttggagaagaacagctcggag
ttcaatgttactaggagttatttggattggttgacaaacattccttggggtgtgacaacg
aaagagaactttgacatttcagatgctagaaccgttctggatcgtgatcattacggtatg
gacgaggtgaaggagactatcttacaatttatcgcagtgggtaaactcaaaggttccgtc
cagggcaagattctgtgcctagcgggtccacctggtacgggtaagacatcgattgctgag
agtgtagcagaggcacttgggcgaaagttctttcgtttcagtgttggtggtatgtctgat
gtcagcgagatcaaaggccacagaaggacatatgttggcgcaatgcccgggaaaatcatc
cagtgcttgaagagtacgggttcgtccaacccacttgtactgattgacgagattgataag
cttggcagagacttcagaggcgacccggccagtgctctgctcgaggtgctagatcccagt
cagaactcaacgtttcgcgatcacttcattgatgcaccagttgacatctccaaagtactc
ttcatgtgtaccgcaaacgagcttgatgctatccctggaccactgttggatagaatggag
gtgattcgtttgtcaggatacgatgtgcctgagaagttggagattgctcagcagtacttg
gtgcccaaatcaatggtgaacagcggattgatggtaaaggaaattcacgaggacgattcg
accgaaaaagacaacgctttggaaagtctcgtccgttggtactgcagagaggctggggta
agaaacctagcgaagaagattgacaaaattacacgtctactcagtctgcaggtagtcgca
gaggaggaaggtgcaatgttgaccgacaagagcactagaaagtctgacacgtgggaggta
tcatctgacaatctgcatgagtacgttggcaagccaatctttacgtccgatcgtctctac
gacactgaccctcttccccacggcattgtaatgggacttgcttggacgagcatgggaggg
tcggctctctatattgaaacccaaggcatcaaacgtggcttggacaccgaagggaagcgt
cgtggtggaggtacactgaagacaactggccaaatgggagatgtaatgaaggaaagtact
cagattgcttacacggtagcccgagctcgtatggcagaaattgcacccgacaattccttc
tttgacgatactgatattcatatgcacgttcctgagggggcaacgcccaaagatgggcct
tcggccggtgtcaccatggtgactgcaatgctctcacttgcactcgacagaccgatcaag
agtgatctcgcaatgactggagagatcagtttaactggaaaggtactcgcagttggaggc
ataaaggagaaaacgatggcggccagaagggctggaatcagcacaatcatattgcctgaa
gactgtagacgcgactttgaggaactacctgactacctgaaggaaggactcgacgttcac
tttgctaccgagtactcagatgtatacgacgttgcttttggcaagtcgtgttga
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