Thalassiosira pseudonana: THAPSDRAFT_35968
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Entry
THAPSDRAFT_35968 CDS
T01078
Name
(RefSeq) predicted protein
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tps03029
]
THAPSDRAFT_35968
Enzymes [BR:
tps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
THAPSDRAFT_35968
Mitochondrial biogenesis [BR:
tps03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
THAPSDRAFT_35968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
DnaB_C
Toprim_2
Toprim_4
AAA_22
ATPase
AAA_16
Toprim
AAA_29
ABC_tran
nSTAND3
T2SSE
cobW
Lar_restr_allev
AAA_23
AAA_30
AAA_14
NTPase_1
NACHT
Motif
Other DBs
NCBI-GeneID:
7443422
NCBI-ProteinID:
XP_002291678
JGI:
35968
UniProt:
B8C699
LinkDB
All DBs
Position
8:7459..11497
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AA seq
610 aa
AA seq
DB search
FRYTSSHVILQECPFCPKPTKGRVDNQYKLYVSVGGGAYFCHRCGAKGSWYDFKSELGGF
SVEQHSNACANSDSSGQGGRQQASNSINSQPWNWNTKNNNGMNYLGSILQYLTNTRGLDR
SVLRKYGVGCASYNFHSKDGSTVIEPTTTQQDLNSTHGPYIPRRIKVRSIEKKAWQRLDP
PGGGFGLFGWHTVPHDATEIIITEGEFDAMAVYQATGRPAVSLPNGCRSLPMEVLLLLEN
FDTVYLWMDNDGPGREGAEMFARKLGVERCLLVQPSGKRGAPPEPPKDANEALLTGWDIN
ELLEEASELPHERILKFSDLRDQVIHEIINPEKYRGTPIPSLPGFTSLIKGFRRGELTVL
TGPTGSGKTTFLGQTSLDLVEQGINVLWGSFEIKNTRLMHKLLQQYMKDVLPVGLAEKDL
SVEERQNAMTALTSLADKFESLPMYFMKFHGGSDVDDVLDAMEYAAYVHDVEHIILDNMQ
FMISRQSVEGKGSSFDKFDMQDIAIEKFRKFATEYNVHVTLVVHPRKEDEGAKLGMSSFY
GSAKATQEADTVLILQSDGKRKFVDVKKNRFDGTIGHSPLYFQRKSGRYSENPDIVRNEA
KSNNNNNDRD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
tttcgatacacctcctcccacgtgatactgcaggagtgtccgttttgtcccaagccgacg
aaggggagggtggacaatcagtacaagctgtacgtcagtgtggggggtggtgcgtacttt
tgtcatcggtgtggcgccaagggaagttggtacgatttcaagagtgagctgggtggcttt
tcggtagagcagcattccaatgcctgtgccaacagtgatagtagtggacaaggtggacga
cagcaggcgagtaacagcatcaattcgcagccttggaattggaacacgaagaacaacaat
ggcatgaactatcttggctccatacttcaataccttaccaacacacgtggactggacaga
tccgtcttgcgaaagtacggagtaggatgtgcctcgtacaactttcacagtaaggatggt
agcactgtgatagaaccgacaacaacgcaacaagacctcaactccacccacggtccctac
atcccccgacgaatcaaagtccgctccatagaaaaaaaggcatggcaacgtctcgaccca
ccaggaggaggcttcggtctctttggctggcacaccgtaccccacgatgctactgaaatc
atcattaccgagggagaattcgacgccatggcagtctatcaggctaccggtcgtccagcc
gtgagtttgcccaacggatgccgtagtttgcccatggaggtgcttttgttgttggaaaac
tttgatacagtgtatttatggatggataatgacggaccggggagagagggggcagagatg
tttgcgaggaagttgggtgtggagaggtgtttgttggtgcagcctagtggaaagaggggt
gctcccccagaacctccgaaagatgccaatgaagcattgctcacaggttgggatatcaat
gaattgttggaagaggcaagtgaactaccgcatgaacggatattaaagttttcggatttg
agagatcaggtcattcatgaaattatcaacccagaaaagtaccgcggtacaccgataccg
agtctgccgggatttacatcgctgattaaggggtttcggcgtggtgaactgacggtgttg
acaggtcctactggatcaggcaagacaacattcctcggtcaaacgtcacttgacttggta
gagcagggtatcaacgtcctatggggtagttttgaaataaaaaacacacgactcatgcac
aaactgctccagcagtacatgaaggacgttctacctgttggtctagctgagaaagatctt
tctgtggaagaaagacagaatgcaatgaccgcgttgacgtctcttgctgacaagtttgaa
tcgttgccaatgtacttcatgaagtttcatggagggagcgacgttgatgacgttttggat
gccatggaatatgcagcatatgttcacgacgtggaacacatcatacttgacaacatgcaa
tttatgatctcaaggcaatcagtggaggggaaaggatcgtcgttcgacaagtttgatatg
caggacattgccattgagaagtttcgtaaatttgccacagaatacaacgttcatgtcaca
ctggtggtgcatccacggaaagaagatgaaggagccaagctcggcatgtcctccttttac
ggatctgccaaggcaactcaagaagctgatacggttttgatcttacaaagtgacggtaaa
cgcaagttcgtagatgtcaaaaagaaccgatttgatggaacgattggacattcaccttta
tatttccagcgtaagagtggtagatatagcgagaacccagacattgtgagaaatgaagcc
aaatcaaacaacaataacaatgaccgagac
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