Thalassiosira pseudonana: THAPSDRAFT_36203
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Entry
THAPSDRAFT_36203 CDS
T01078
Symbol
SMT1
Name
(RefSeq) sterol 24-C-methyltransferase
KO
K00559
sterol 24-C-methyltransferase [EC:
2.1.1.41
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00100
Steroid biosynthesis
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
THAPSDRAFT_36203 (SMT1)
Enzymes [BR:
tps01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.41 sterol 24-C-methyltransferase
THAPSDRAFT_36203 (SMT1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol_MT_C
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_23
CMAS
Ubie_methyltran
mRNA_G-N7_MeTrfase
Motif
Other DBs
NCBI-GeneID:
7451008
NCBI-ProteinID:
XP_002292358
JGI:
36203
UniProt:
B8C8Q5
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All DBs
Position
9:1123429..1124690
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AA seq
337 aa
AA seq
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SNVQSSVSEYERLHLTSTSTTERNSNYATLVNSYYDLATLFYEWGWGASFHFSNRHPHES
FDEATRRHEFYLAMKEGSTPSMASVKVLDVGCGIGGPMRNICKFTGADITGLTLNQYQVD
RGNELCRADAHFHNHSSETNGLPPIRCRSTQGDFMKQPFEASTFDAAYAIEATCHAPDRV
GCYSEIYRVLKPGSIFACYEWCLTDKYDPNNEEHVLIKKQIEEGDGLPDIATTHYCLTAL
KKAGFEILEERDCVNDEMLPLMSSWNPFTQRFQFNWFGLRLTKYSLKIMEFLRLAPVGTS
RTQILLQSGGMGLARGGELGIFTPMYLMVGRVPLDKK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
tccaacgtccaatcctccgtctccgaatacgaacgcctccacctaacatccacatccacc
accgaacgcaactccaactacgccaccctcgtcaacagctactacgatctcgccaccctc
ttttacgaatggggatggggagctagctttcacttttccaataggcatcctcatgaatcg
tttgatgaggctacgaggaggcatgagttttatttggcgatgaaggagggaagcactcca
tccatggccagtgtcaaagtgttggatgtcggatgtggcatcggtggaccaatgagaaat
atttgcaaattcaccggagccgatattacaggattgacattgaatcagtaccaagtcgat
cgcggtaacgagttgtgtcgtgccgatgctcactttcacaatcactcctccgagacgaac
ggcttgcctccgatccgctgtcgctccactcagggtgacttcatgaaacaaccctttgaa
gcgtcgacgtttgatgccgcctatgctatcgaggcgacgtgtcatgctcccgatcgtgtc
gggtgctattcggaaatctaccgtgttctcaagcctggatccatctttgcctgttatgaa
tggtgccttactgacaagtatgatcccaacaacgaagaacacgttttgattaagaagcag
attgaggagggagatgggttgccggatattgcaacgacgcattattgtttgacggcattg
aagaaggctgggtttgagatcttggaggagagggattgtgtgaatgatgagatgcttccc
ctaatgtcgtcttggaatcctttcacacaacgcttccaatttaactggttcggacttcgt
ctcaccaaatactccctcaaaattatggagttcctccgattggcacccgtgggtacatca
cgaactcaaatcctgcttcagagtggtggaatgggattggcacggggaggagagttggga
atcttcactccaatgtacttgatggttggaagggttcctttggataagaagtag
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