Thalassiosira pseudonana: THAPSDRAFT_36204
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Entry
THAPSDRAFT_36204 CDS
T01078
Name
(RefSeq) ABC transporter
KO
K05662
ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
tps
Thalassiosira pseudonana
Pathway
tps02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
THAPSDRAFT_36204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tps02000
]
THAPSDRAFT_36204
Transporters [BR:
tps02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
THAPSDRAFT_36204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
nSTAND3
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
DUF815
MMR_HSR1
AAA_29
AAA_15
ATP-synt_ab
NACHT
AAA_25
DO-GTPase2
ORC-CDC6-like
nSTAND1
AAA_5
AAA_24
AAA_19
Viral_helicase1
AAA_28
PRK
Motif
Other DBs
NCBI-GeneID:
7448120
NCBI-ProteinID:
XP_002292329
JGI:
36204
UniProt:
B8C8K6
LinkDB
All DBs
Position
9:938438..940297
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AA seq
584 aa
AA seq
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IRYRVILSVLLMLAGKGVTIATPFLFKMLVDTIPGHTATTSAAGASAASTLLLNKIPISL
PILLLIAYGTCRSLSSLFRESTNAIFAHVAQSAIRSVGRSTFDHVHSLDLSYHLNRNTGA
LSRVLERGSRSISFALNALTFNTIPTLLEVGVVSGLMFKKFGIMHSLTVLLTIFAYSAFT
IFITQWRSAIRKDMNGLENKASGKVSDSLLNYETVKYFNNEKHEGEVYESTLHKYQAMAL
KAASSMSILNFGQNAIFSVGLVTIMFLTLRNVNKGLATVGDLVLVNGLLFQLSVPLNFIG
WVYQEVRQSFIDMEAMFELRDTKPAIVDKPDAVDYVPSRDGTTIEFDNVEFGYKTSPPPI
LQKTTFTIPQGKTVAVVGSSGCGKSTLLRMLYRFYEQDKGLVKLGGKDLSSYTTESVRKA
IAVVPQDVVLFNDSIGYNIHYGNLNASWDEVVSAAKKAHLHDIIMKLPEGYNTIVGERGL
KMSGGEKQRVSIARAILKKAPILLCDEPTSSLDMHTELEIMNNLKEIGRDEDTTCVIIAH
RLSTIQDCDLIVVMANGKVVESGSHDELVRQGGRYNQLLTFQRS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
attcgctaccgagttattctatcagtattgctcatgctagccggaaaaggtgtcaccatt
gccactcctttcctcttcaaaatgttggtggatacgattccaggccacactgctaccact
tcagctgccggggcatcagcagcgtcgacgctgcttttgaacaagattccaatctctctt
ccaatcctacttctcattgcctacggaacatgtcgttcattatcttcattgtttagggag
agtaccaacgccatctttgctcatgtcgcccaatctgccattagatccgtgggacgatca
acgtttgatcacgtgcacagtttagacctgtcctatcacttgaatcgcaacacaggagca
ttatcacgagtgctagaaagaggaagtcgcagtatcagctttgcactcaatgcactcacg
ttcaataccattccaacactgcttgaagttggtgtagtctccggcctcatgttcaaaaag
tttgggataatgcattctctcacggtactgttgacgatatttgcttattcggcattcact
atatttattactcagtggagatcggccattcgcaaggatatgaatggattggagaacaag
gcttcggggaaagtaagtgatagtttgttgaactatgagactgtcaagtatttcaacaac
gagaagcacgagggagaggtgtatgagagtacattgcataagtatcaagccatggcattg
aaggctgcgtcgagtatgagcattctcaattttggacagaatgcgatattctcagtgggg
ctagttaccattatgttcttgacgttgaggaatgtgaacaagggattggccactgtgggt
gatttagtgttggtgaatgggttgctattccagttgagtgtgcctttgaatttcattgga
tgggtgtatcaagaagtgagacagagctttattgacatggaggccatgttcgagctccgg
gatactaaaccagcgattgtggacaagcctgatgcagtggactacgttccttctcgagat
ggtactacgattgagtttgacaacgttgaatttggatacaagacatctcctccgcctatt
ctccaaaagacaaccttcacaataccgcaaggcaaaactgtcgctgtcgttggttcttcg
ggatgtggaaagagtacattgcttcgtatgctgtaccgcttctacgagcaagataaggga
ttggtgaagctcggaggaaaggacctttcatcctacacaacagagtcagtacgaaaggca
attgctgttgtcccccaggacgtggtactgttcaacgattctatcgggtacaatatacac
tacggcaatctgaacgcctcttgggatgaggtagtctcggctgcgaagaaggcacacctg
catgatatcattatgaagcttcctgaaggctacaatacaatagtaggagagcgaggactc
aagatgtcaggcggcgagaaacaaagagtcagtatagcccgagccattctgaagaaggct
ccgatactcctttgcgatgaacctacgtcgtctttggatatgcatactgagttggagatt
atgaacaatctgaaggagattgggagagacgaggatacgacttgtgtcattatcgcccat
cgcctctcgactattcaggattgcgacctgattgtcgtcatggccaatggtaaagtggtt
gagagtggaagtcatgacgagttggtgaggcagggagggaggtataaccagttgttgaca
tttcagaggagt
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