KEGG   Thalassiosira pseudonana: THAPSDRAFT_36204
Entry
THAPSDRAFT_36204  CDS       T01078                                 
Name
(RefSeq) ABC transporter
  KO
K05662  ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
tps  Thalassiosira pseudonana
Pathway
tps02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:tps00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    THAPSDRAFT_36204
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tps02000]
    THAPSDRAFT_36204
Transporters [BR:tps02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB6, 7 subgroups
    THAPSDRAFT_36204
SSDB
Motif
Pfam: ABC_tran ABC_membrane SMC_N nSTAND3 ABC_ATPase AAA_22 RsgA_GTPase AAA_16 DUF815 MMR_HSR1 AAA_29 AAA_15 ATP-synt_ab NACHT AAA_25 DO-GTPase2 ORC-CDC6-like nSTAND1 AAA_5 AAA_24 AAA_19 Viral_helicase1 AAA_28 PRK
Other DBs
NCBI-GeneID: 7448120
NCBI-ProteinID: XP_002292329
JGI: 36204
UniProt: B8C8K6
LinkDB
Position
9:938438..940297
AA seq 584 aa
IRYRVILSVLLMLAGKGVTIATPFLFKMLVDTIPGHTATTSAAGASAASTLLLNKIPISL
PILLLIAYGTCRSLSSLFRESTNAIFAHVAQSAIRSVGRSTFDHVHSLDLSYHLNRNTGA
LSRVLERGSRSISFALNALTFNTIPTLLEVGVVSGLMFKKFGIMHSLTVLLTIFAYSAFT
IFITQWRSAIRKDMNGLENKASGKVSDSLLNYETVKYFNNEKHEGEVYESTLHKYQAMAL
KAASSMSILNFGQNAIFSVGLVTIMFLTLRNVNKGLATVGDLVLVNGLLFQLSVPLNFIG
WVYQEVRQSFIDMEAMFELRDTKPAIVDKPDAVDYVPSRDGTTIEFDNVEFGYKTSPPPI
LQKTTFTIPQGKTVAVVGSSGCGKSTLLRMLYRFYEQDKGLVKLGGKDLSSYTTESVRKA
IAVVPQDVVLFNDSIGYNIHYGNLNASWDEVVSAAKKAHLHDIIMKLPEGYNTIVGERGL
KMSGGEKQRVSIARAILKKAPILLCDEPTSSLDMHTELEIMNNLKEIGRDEDTTCVIIAH
RLSTIQDCDLIVVMANGKVVESGSHDELVRQGGRYNQLLTFQRS
NT seq 1752 nt   +upstreamnt  +downstreamnt
attcgctaccgagttattctatcagtattgctcatgctagccggaaaaggtgtcaccatt
gccactcctttcctcttcaaaatgttggtggatacgattccaggccacactgctaccact
tcagctgccggggcatcagcagcgtcgacgctgcttttgaacaagattccaatctctctt
ccaatcctacttctcattgcctacggaacatgtcgttcattatcttcattgtttagggag
agtaccaacgccatctttgctcatgtcgcccaatctgccattagatccgtgggacgatca
acgtttgatcacgtgcacagtttagacctgtcctatcacttgaatcgcaacacaggagca
ttatcacgagtgctagaaagaggaagtcgcagtatcagctttgcactcaatgcactcacg
ttcaataccattccaacactgcttgaagttggtgtagtctccggcctcatgttcaaaaag
tttgggataatgcattctctcacggtactgttgacgatatttgcttattcggcattcact
atatttattactcagtggagatcggccattcgcaaggatatgaatggattggagaacaag
gcttcggggaaagtaagtgatagtttgttgaactatgagactgtcaagtatttcaacaac
gagaagcacgagggagaggtgtatgagagtacattgcataagtatcaagccatggcattg
aaggctgcgtcgagtatgagcattctcaattttggacagaatgcgatattctcagtgggg
ctagttaccattatgttcttgacgttgaggaatgtgaacaagggattggccactgtgggt
gatttagtgttggtgaatgggttgctattccagttgagtgtgcctttgaatttcattgga
tgggtgtatcaagaagtgagacagagctttattgacatggaggccatgttcgagctccgg
gatactaaaccagcgattgtggacaagcctgatgcagtggactacgttccttctcgagat
ggtactacgattgagtttgacaacgttgaatttggatacaagacatctcctccgcctatt
ctccaaaagacaaccttcacaataccgcaaggcaaaactgtcgctgtcgttggttcttcg
ggatgtggaaagagtacattgcttcgtatgctgtaccgcttctacgagcaagataaggga
ttggtgaagctcggaggaaaggacctttcatcctacacaacagagtcagtacgaaaggca
attgctgttgtcccccaggacgtggtactgttcaacgattctatcgggtacaatatacac
tacggcaatctgaacgcctcttgggatgaggtagtctcggctgcgaagaaggcacacctg
catgatatcattatgaagcttcctgaaggctacaatacaatagtaggagagcgaggactc
aagatgtcaggcggcgagaaacaaagagtcagtatagcccgagccattctgaagaaggct
ccgatactcctttgcgatgaacctacgtcgtctttggatatgcatactgagttggagatt
atgaacaatctgaaggagattgggagagacgaggatacgacttgtgtcattatcgcccat
cgcctctcgactattcaggattgcgacctgattgtcgtcatggccaatggtaaagtggtt
gagagtggaagtcatgacgagttggtgaggcagggagggaggtataaccagttgttgaca
tttcagaggagt

DBGET integrated database retrieval system