Thalassiosira pseudonana: THAPSDRAFT_3629
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Entry
THAPSDRAFT_3629 CDS
T01078
Name
(RefSeq) predicted protein
KO
K11986
ubiquitin carboxyl-terminal hydrolase 3 [EC:
3.4.19.12
]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tps01002
]
THAPSDRAFT_3629
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tps04121
]
THAPSDRAFT_3629
Enzymes [BR:
tps01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
THAPSDRAFT_3629
Peptidases and inhibitors [BR:
tps01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
THAPSDRAFT_3629
Ubiquitin system [BR:
tps04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
THAPSDRAFT_3629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
7451279
NCBI-ProteinID:
XP_002288424
JGI:
3629
UniProt:
B8BYB5
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All DBs
Position
3:1402103..1403996
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AA seq
600 aa
AA seq
DB search
MADACPHLREPTKAAWKRLRNPLTWGCDICHSTDGIWCCLSCGHIGCGRRAHLPALGGGH
SKHHYHTTHINQESISASSSDGKKKRVKILRILRSSSKGSCISNDAVGNADSQSNTAEES
AGEVGPSGHEVCIDIVSKAVHCYECDDYVLSDAPWLAKLRNEIDVIEQRREETSSTNSST
DDEERKEIMDYDYEMVDPLDDDANKEQQINDKKMPAAASAQAEVDSPANETISPYEPGIT
GLTNLGNTCYMNSVVQMLSHCSGFRSFFRDFLRAAAPLRLAGEGGYKISRQSTTRLKDTL
HVDTSPDKLALTEATHALLRVLWSGRWPYVSPRYFVHAVWKHGGLFAARKQQDANEFLNF
YLGRVDDELKAPKATSSVMMDLFGIDQYQEVQCDGCSTVTKRTEPLLGLVLSLPDEDKTD
ASVMADSDSVKVEKEIDLLECFKSLQTTGRFIEENQFHCDKCNCKRDATWSVALQRRPQS
LLISLRRTLWNPEKGVHKDSRRVKFPVELDASQLLEMENDKTSPVDAFEGCHYSLISVVS
HSGSSPFVGHYISWCRVDGVNGKKWYLFNDSSVTRASEANVLEAEAFILLYERRGLPSAG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcatgtcctcatctacgcgagccaacaaaagctgcttggaaacgactacgt
aatccattgacatggggctgtgatatctgtcatagcactgatggaatttggtgctgtctg
agctgtggccacattggatgtggtagacgagcacatcttccggctctcggtggaggtcac
tcaaaacatcactatcacacaactcacatcaaccaagaaagcataagtgcaagtagcagc
gatggaaagaagaaacgagttaagatattgaggatattgcgtagttcgagcaaaggaagt
tgtattagcaatgatgcagttggtaatgctgatagccagagcaatactgcagaggagagt
gctggcgaggttggtcctagtgggcatgaagtttgtattgacatcgttagcaaggctgtt
cattgctacgaatgcgatgattacgtactatcagatgctccatggttggcgaagttgcgc
aatgaaatagacgtgattgaacaacgtcgtgaggaaacctcgtcaactaattcatcaacc
gatgacgaagaacgaaaggaaatcatggactatgattacgagatggtggatcctttagac
gacgatgcgaacaaagaacaacagatcaatgacaagaaaatgccagcagcagcgagtgca
caggctgaagtagactcgcctgccaacgaaaccatctcgccttacgaacctggaatcact
ggacttacaaacttgggaaatacctgctacatgaatagcgttgtacaaatgctttcgcat
tgttctggtttccgtagtttctttcgtgacttcctacgagcagctgcccccttacgtctt
gcaggcgaaggggggtacaagatatcgcgacaatctacgacaagactaaaagatactttg
catgtcgacacatctcccgacaaactagcgttgacggaggcaacacatgcattactacgg
gtattgtggagtggtagatggccttacgtcagtcctcgatactttgtccatgcagtttgg
aagcatggggggctttttgcagcgaggaagcaacaagacgctaacgagtttctcaacttt
tacctcggtagagtagatgatgagctcaaggctccaaaggccactagctcagtgatgatg
gatctatttggtatcgatcagtatcaagaggtacagtgcgatggatgcagtactgtgaca
aaacggacagagccactgttaggtttagtactatcccttccagacgaggataagacagat
gcaagtgttatggctgactctgattcagtcaaggttgagaaggagattgatctgctagaa
tgcttcaaatccctgcaaaccaccggcagattcatagaagagaatcagtttcactgcgat
aagtgcaactgcaaaagggatgcaacttggagtgtcgcgctgcaacgtagacctcagtct
ctgctcatatcattgcgtcggacgctgtggaatccagaaaagggcgtgcataaagacagt
aggagagtgaaattcccagtcgagctggacgcatcacaattgcttgagatggagaacgat
aagacttcgccagttgatgcttttgaaggatgtcattatagccttatctctgttgtttcg
cattcgggttcaagcccgtttgttggtcattatatctcgtggtgccgggtagatggagta
aatggcaagaagtggtatctgttcaatgactcgtctgtaacgcgtgcgagtgaggccaat
gtgttggaggccgaggcctttattctcttatatgagagacgaggactgcctagtgcgggg
tag
DBGET
integrated database retrieval system
