Thalassiosira pseudonana: THAPSDRAFT_36563
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Entry
THAPSDRAFT_36563 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
nSTAND3
Zeta_toxin
IQ
NPHP3_N
AAA_16
AAA_6
Motif
Other DBs
NCBI-GeneID:
7444525
NCBI-ProteinID:
XP_002296378
JGI:
36563
UniProt:
B8LBM5
LinkDB
All DBs
Position
11
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AA seq
863 aa
AA seq
DB search
MDNDMISLPHLHEPAILHAVSERYFRGEIYTWTGPVLIAVNPFQRLPLYTREILESYRQE
GLLRSQNLGDSAKKLGPHVYSIADRSYRQMMSEQRKSQSILISGESGAGKTETTKIVMLY
LTTLGSAGEVAPNEGEEGGKLTIMERVLQSNPILEAFGNAKTLRNDNSSRFGKFIELGFN
RAGILQGAKVQTYLLEKVRLGFHASGERNYHIFYQLLRGASEEQHHKYCFHDGITGGLEL
ANFFHYTGQGGAPQLREFTDEEGLQYTLKSMRSMGWGEDRIDNVLSIIAGILHLGQVSFE
SKTNEGGQEIAQIGDEKTVADAAKLLGVDVHKLITALTVRIMVTRGEEIRIDLTPDKASD
ARDALSKTIYGAMFLWVVKEVNNSIKWENDKDIRSSAGVLDIFGFESFATNSFEQLCINF
TNEALQQQFNKFIFKLEQEEYERESINWAFISFPDNQDCLDTIQARPMGILAMLDDECKL
GQRGSDKNWAQRLNETYLPEKNQTISDNTRYSATAIQKAKGIFCVRHFAGNVQYTAETGF
LEKNRDEIPLTAKSLFEEDSSDLIKEIYDVQLEQSEDTGDKGPSKSKTVSQQFKAQLQSL
IEMIETTDPHYIRCLKPNDAAKPKLLTRKRLTEQLRYGGVLEAVRVARMGYPVRLDHAGF
FKRYRMLLPSIPEDVLTWSMEDEDPQKLCVKFLDVLLEEGAKPLGVSKVFMRKGPHDKLE
SHRVFHQNASSTLIQSWMKGMQQRRRYLISGDAALTIERWYRGCMGRARWWKLREAQASQ
LLTNNFRMQVIRIKYNKSRAGTILLQAQYRGRSVRRVNALRKIQAYRRMYLSKTAYRKLR
SATIAIQCCARRGAAKAEFAEIK
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggataatgacatgatttcgttgcctcacttgcacgagccggcgatactgcatgccgta
agcgagaggtattttaggggggagatttacacgtggacgggtcctgtgttgattgcggtg
aatccgtttcagagattgccgttgtacactagggaaatcctcgaatcttaccgtcaagaa
ggactcctccgctcccaaaacctcggtgattccgccaagaagctcggtccgcacgtctac
tccatcgccgatcgttcctaccgtcaaatgatgtccgaacaacggaaatcacaatccatt
ctcatctcaggagagtccggtgcggggaaaacggagactaccaagattgtcatgttgtat
ttgactacgctcgggagtgcgggggaggtcgctccgaacgaaggagaggaggggggaaag
cttactattatggagagggtgcttcagtcaaatcccatccttgaagcgtttggtaatgcc
aagacactacgtaatgacaactcttcccgttttgggaaattcattgaacttggattcaac
cgggctggtatactccaaggagccaaggtacaaacatacctccttgaaaaggtccgtctt
ggcttccacgccagtggagaacgaaactatcacatcttttatcaactgcttcgtggagcg
agtgaagagcaacatcacaagtattgcttccatgatgggattacgggagggttggagttg
gccaactttttccattatacggggcagggaggtgctcctcagttgagggagtttacagat
gaggagggattgcagtatacgttgaagtcaatgaggagtatgggatggggagaggatagg
attgacaatgtgctcagtatcattgctggtatcttgcacttgggtcaagtgtcgtttgag
agcaagacgaacgagggagggcaggagattgctcagattggggacgagaagactgtggca
gatgctgccaagttgttgggagtggatgtgcacaagctcattacggcgttgactgtgcgt
atcatggtgacgaggggagaggagattcgtattgatttgactcctgataaggcatctgat
gctagggacgcattgtcaaagactatctacggagcaatgtttctttgggtggtgaaggag
gtcaacaacagtatcaagtgggagaatgacaaggacattcgttcctctgcaggagtgttg
gatatctttggatttgagagttttgccaccaactcctttgagcagctttgtattaacttt
acgaatgaggccttgcagcagcaattcaacaagttcattttcaagttggagcaggaggaa
tatgagagggagtctatcaactgggccttcatttctttccctgacaatcaggattgtttg
gatacgattcaggctcgtcccatgggtattttggccatgttggatgatgagtgtaaattg
gggcaacgaggaagtgataagaactgggcacagcgtttgaacgaaacgtacctccccgaa
aagaatcaaaccatctcggacaacactcgttacagtgccactgccatccaaaaggccaag
ggaatcttctgtgttcgtcactttgctggaaatgtgcaatataccgctgagactggcttt
cttgaaaagaatcgtgatgaaatccctctcactgccaaatccttgtttgaggaagattcg
tctgacctcattaaggagatttacgatgtacagcttgaacagtcggaggacactggcgac
aaaggaccttccaaatccaagacggtgagccaacagttcaaggcacagcttcaaagcctc
attgaaatgattgaaacgaccgatccgcattacatccgttgcttgaagccaaacgatgca
gccaagccaaagctgctcactcgaaagcgtctcactgaacaacttcgttacggtggtgtg
ttagaggccgttcgtgtggctcgtatgggataccccgttcgtctcgatcatgctgggttc
ttcaaacgatatcgtatgcttctcccttccattcctgaggacgtcttgacgtggagcatg
gaggatgaggatccgcagaagttgtgtgtaaagttcttggatgtcttgttggaagaggga
gccaaaccgcttggtgtgtcaaaggtgttcatgaggaagggaccacacgacaaattggag
agtcacagggtgttccaccagaatgccagtagtacgttgattcagagctggatgaagggt
atgcagcagaggaggagatacctcatttctggagatgctgctctcactattgagaggtgg
taccgtggttgcatggggcgtgctagatggtggaaacttcgtgaggctcaggcaagtcag
cttcttaccaacaacttccgcatgcaggtcatccgcatcaaatacaacaaatctcgcgca
ggcaccattcttctccaggctcaataccgcggacgctctgttcgtagagtcaatgctctc
agaaagatccaggcctaccgccgcatgtacctcagcaagacagcctacaggaagctcaga
tctgcaaccattgcaattcagtgttgtgctcgccgtggggctgcaaaggcagagtttgct
gagatcaag
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