Thalassiosira pseudonana: THAPSDRAFT_36597
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Entry
THAPSDRAFT_36597 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tps03016
]
THAPSDRAFT_36597
Transfer RNA biogenesis [BR:
tps03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
THAPSDRAFT_36597
Prokaryotic type
Methyltransferases
THAPSDRAFT_36597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
MMR_HSR1
TrmE_N
FeoB_N
Dynamin_N
RsgA_GTPase
Arf
ABC_tran
AIG1
MMR_HSR1_Xtn
GT-C_AftD
Motif
Other DBs
NCBI-GeneID:
7444515
NCBI-ProteinID:
XP_002296502
JGI:
36597
UniProt:
B8CF78
LinkDB
All DBs
Position
11
Genome browser
AA seq
472 aa
AA seq
DB search
LPNARMASLRTLYDPTADAKGTSDDEEEMQQQKRDPLDSALVLTFEGPNSFTGEDIVELH
CHGSRAVVHGVLSALSSLSSRAIPLQLRPADPGEFTQRAYAHGKLGLVEVEALADLIVAD
TSLQRKQALQQFDGRLSRLYGGWREELIKGLAHAEAVIDFGDDEALDAHDEFDDGLNAND
GGMSIWGTIAPRIRSLRQAMNRHLADASRGELLRDGLRIAIVGRPNAGKSSLLNLLAGRD
AAIVSSSPGTTRDVVEVMLDLGGVRCTLLDTAGVREEKEEGVNEIEVEGMKRARRAARDA
HIIVGVVDATDLSRGLEAVDELIRVESESDESSSLLNRDNVLYVLNKLDLVEGNENSINS
KEQSNSPKFGISCTTSEGVDDFLSSLTQQALSLVSGDRDEGAVITRARHRRHVEAASDAL
ERFEELSGQGYMALDMAAEELRLASSELGRVTGAIDVEDVLDVLFADFCIGK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttaccaaacgcacggatggctagtttgagaacgttgtatgatcctacagctgatgcaaaa
ggtacaagtgacgatgaagaggaaatgcaacaacagaagcgagatcctctggattcggct
ctggtactgacatttgaaggcccaaacagctttacgggagaagacattgttgaactccac
tgccatggatctcgtgcagtagtccacggagttctgtcggctctatcatctctttcgtca
cgtgcaataccattgcaactccgtccagctgatccaggagagttcactcagcgagcctat
gcgcacggtaaactgggattggtcgaggtagaagcccttgctgacttgattgtagctgat
acgagtttacaacgcaagcaggcattgcaacagtttgatggtagattgagccgactgtat
ggaggatggagagaggagttgatcaaaggattggctcatgctgaggcagtcattgacttt
ggcgatgatgaagctctcgatgcccatgatgagtttgacgatgggttgaatgcgaatgat
ggaggtatgagtatttggggaacaattgcacctaggatacgttctctgcgtcaagccatg
aatcgtcatctagccgatgcctctcgtggggaattgctcagagatggattgcgtattgct
attgtcgggcgaccaaatgctggaaagtcaagtcttctcaatttactcgctggtagagat
gctgccattgtaagctccagtcctgggacgactcgagatgtcgtggaggtaatgttggac
ttgggaggtgttaggtgtacattactggatactgcgggtgtgagagaagaaaaggaagag
ggagtcaatgaaattgaagtggagggtatgaaacgggccagaagagcagcgagagatgca
cacattattgtaggcgttgtggatgctactgacttgagtagagggttggaggcagtggat
gagttgattcgagtagagagtgaatcggatgagagttctagtttgttaaacagagacaac
gtactctatgtgctgaacaaacttgatctcgtggaaggaaatgagaactcaatcaactcc
aaagaacaatccaacagtccaaagtttggtatcagctgcacaacaagcgaaggagtcgac
gactttctctcttctctgacgcagcaagcattatcactggtatctggtgacagagatgaa
ggagctgtaatcacaagagctcgtcacagacgtcacgtcgaagccgcatcggatgcattg
gaaagatttgaagaactgagtggacaaggatacatggcattggacatggcagcagaggag
ttgcgattggcttcgtctgagctaggccgagtgactggtgcaattgatgtagaagacgta
ttggacgtgctgtttgctgacttttgtattggtaagtga
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