Thalassiosira pseudonana: THAPSDRAFT_36614
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Entry
THAPSDRAFT_36614 CDS
T01078
Name
(RefSeq) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00300
Lysine biosynthesis
tps00470
D-Amino acid metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
THAPSDRAFT_36614
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
THAPSDRAFT_36614
Enzymes [BR:
tps01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
THAPSDRAFT_36614
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-GeneID:
7444528
NCBI-ProteinID:
XP_002296516
JGI:
36614
UniProt:
B8LBN1
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Position
11
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AA seq
323 aa
AA seq
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MKINALLSLLMAASSEAFATLSSQRTSSTSLNAKLGDSIEFAKYEGLGNDFILIDDRDRE
TPRLTPEQSERLCNRNFGVGGDGVIFALKAPQDYDFTMRIYNSDGSEPEMCGNGIRCFAQ
FLKDLGEDAKSYKVNTLAGPIVPEMNPDTITVDMGEPILDGPSVPTTLAPNSEHNSVLEQ
THVDKNGKEWKISAVSMGNPHAIIFVDDLEKDIDFAVDGPALESDTGAFPAKTNVEFVQV
MSPNHLKMKVWERGAGPTLACGTGTCALVVAAIRANKIPRPGKEGVRVTLPGGDLFIEWR
EENNRIYMTGPATLSFKGTALLK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaacgccctactctccctcctcatggccgcgtccagcgaagccttcgccacc
ctctcctcccaacgcacctcctcaacctctcttaacgccaagcttggagactcaattgag
tttgcaaagtatgaaggattgggaaatgatttcatcctgatcgacgatcgtgatcgtgag
acgcccagattgactcctgagcagagtgaacgtctatgcaatcgtaactttggagttggt
ggagatggagtcatctttgcactgaaggccccgcaagactacgactttaccatgagaatc
tacaacagcgatggatctgagccggaaatgtgtgggaacggcattcgttgctttgctcag
ttcttgaaggatttaggtgaagacgccaaatcatacaaagtaaacaccctcgcaggacca
atcgtacccgaaatgaaccccgacaccatcaccgtagacatgggagaacccatcctcgac
ggtccctctgtacccacaactctcgcacccaactcggaacacaactccgtccttgagcaa
acgcacgttgataagaatggaaaggaatggaaaattagtgctgtgtccatgggaaatccc
cacgccatcatctttgtggatgatttagaaaaggatattgattttgcggtggatggacct
gcattggagagtgatacgggtgcttttcctgccaagaccaatgtggagtttgtgcaagtc
atgtcacccaaccatttgaagatgaaggtgtgggaacgaggtgccggaccgactctcgct
tgtggtaccgggacgtgtgctttggtggtggctgcgattcgagcaaacaagattccgaga
ccggggaaggagggggtgagggtgacgcttcctgggggagatttgtttattgagtggagg
gaggaaaacaataggatttacatgacggggcctgctacgcttagtttcaagggaacggct
ttgctgaagtag
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