Thalassiosira pseudonana: THAPSDRAFT_36716
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Entry
THAPSDRAFT_36716 CDS
T01078
Symbol
LPD
Name
(RefSeq) precursor of hydrogenase lipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00010
Glycolysis / Gluconeogenesis
tps00020
Citrate cycle (TCA cycle)
tps00260
Glycine, serine and threonine metabolism
tps00280
Valine, leucine and isoleucine degradation
tps00310
Lysine degradation
tps00380
Tryptophan metabolism
tps00620
Pyruvate metabolism
tps00630
Glyoxylate and dicarboxylate metabolism
tps00640
Propanoate metabolism
tps00670
One carbon pool by folate
tps00785
Lipoic acid metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01200
Carbon metabolism
tps01210
2-Oxocarboxylic acid metabolism
tps01240
Biosynthesis of cofactors
Module
tps_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
tps_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
THAPSDRAFT_36716 (LPD)
00020 Citrate cycle (TCA cycle)
THAPSDRAFT_36716 (LPD)
00620 Pyruvate metabolism
THAPSDRAFT_36716 (LPD)
00630 Glyoxylate and dicarboxylate metabolism
THAPSDRAFT_36716 (LPD)
00640 Propanoate metabolism
THAPSDRAFT_36716 (LPD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
THAPSDRAFT_36716 (LPD)
00280 Valine, leucine and isoleucine degradation
THAPSDRAFT_36716 (LPD)
00310 Lysine degradation
THAPSDRAFT_36716 (LPD)
00380 Tryptophan metabolism
THAPSDRAFT_36716 (LPD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
THAPSDRAFT_36716 (LPD)
00670 One carbon pool by folate
THAPSDRAFT_36716 (LPD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_36716 (LPD)
Enzymes [BR:
tps01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
THAPSDRAFT_36716 (LPD)
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
THAPSDRAFT_36716 (LPD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
NAD_binding_8
GIDA
AlaDh_PNT_C
FAD_binding_2
Lys_Orn_oxgnase
HI0933_like
FAD_binding_3
3HCDH_N
Thi4
Motif
Other DBs
NCBI-GeneID:
7444502
NCBI-ProteinID:
XP_002296489
JGI:
36716
UniProt:
B8LBI2
LinkDB
All DBs
Position
11
Genome browser
AA seq
470 aa
AA seq
DB search
DTVVIGGGPGGYVAAIKSAQMGLRTACVEMRGSLGGTCLNVGCIPSKALLQSSHHFHDAK
HHFADHGISMGNGGEVTMDVGKMLDAKAQTVKGLTGGIEHLFKKHKVEYFKGRGTLKGVD
GVEVQLNEGGVESLEAKNIIIATGSEVTPLPPVPVDNAGGKIVDSTGALEISKIPTKMAV
IGGGVIGLEMGSVWSRLGTEVTVIEFMDRLCPAMDQELTKKFQTTLKKQGFKFKLKTKVV
KSEVVGDEVAITTEPSKGGEQTTENYDVVLVATGRRPYTEGLGLENLGIQTDKLGRIQVD
SHFRTAVPSIYAIGDCIDGPMLAHKAEEEGIAAVETIAGFAGHVNYDAIPGVIYTFPEVA
SVGKTEEELKEANVAFNKGSFPFAANSRARANATGNSEGFVKILTDKATDKILGIHIMGP
NAGEMIAEGVLGMEYGASAEDVARTCHAHPTLSEAFKEACMDAYDKPIHF
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gacaccgtagtcatcggcggcggtcccggaggctacgtcgccgccatcaaatccgcccaa
atgggcctccgcacggcctgcgtcgaaatgcgtggatccctcggcggaacgtgcctcaac
gtcggctgcatcccgtccaaggcgttgttgcaatcgagtcatcacttccatgatgccaag
catcattttgcagatcatggaattagtatgggaaatggaggagaggttactatggatgtg
ggcaagatgttggatgccaaggcgcagactgtcaaggggttgacgggggggattgaacat
ttgtttaagaagcacaaggtggagtattttaagggacgggggactttgaagggggtggat
ggtgtggaggtgcagttgaatgaggggggtgtggagagtttggaggcgaagaatattatt
attgctactggttcggaagtaacccctctcccaccagtaccagtggacaacgccggaggc
aaaatcgtagactccacgggagctctcgaaatctccaaaatcccaaccaaaatggcagtc
atcggtggaggagtcattggtctcgaaatgggttcggtctggtctcgtctcgggacggaa
gttacggtgattgagtttatggatcgattgtgtcccgcgatggatcaggagttgacgaag
aagtttcagactacgttgaagaagcaggggtttaagttcaagttgaagactaaggtggtg
aagagtgaggtcgtgggggatgaggtagccattactactgaaccgtcgaagggaggagag
cagactacggagaattacgatgtggtgttggtggctacgggacgtaggccttatactgag
gggttgggattggagaacttgggtatacagactgataagcttggaagaatccaagtggat
tctcactttaggacggcagttccttcaatctacgccattggagattgtatcgatggaccc
atgttggctcacaaggccgaagaagagggtattgccgcggtagagacaattgctggattt
gcaggacatgtcaattacgacgccattccaggagtcatttacacatttcccgaggtggca
tctgttggaaagacggaggaggagctcaaagaagcaaatgttgcattcaataagggatcc
ttcccctttgctgccaattcacgtgcacgtgccaatgctactggaaactcggaggggttc
gtgaagattcttacggataaggcgactgataaaatattgggcattcacatcatgggaccg
aatgctggagaaatgattgccgagggagtattgggtatggagtatggagccagtgcggag
gatgtggcaaggacgtgtcatgcccatcctactttgagtgaggcgttcaaggaagcttgt
atggatgcatatgataaacccattcatttctaa
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