KEGG   Thalassiosira pseudonana: THAPSDRAFT_370
Entry
THAPSDRAFT_370    CDS       T01078                                 
Symbol
RIR1_1
Name
(RefSeq) ribonucleotide reductase large chain subunit
  KO
K10807  ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00230  Purine metabolism
tps00240  Pyrimidine metabolism
tps00480  Glutathione metabolism
tps01100  Metabolic pathways
tps01232  Nucleotide metabolism
Module
tps_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
tps_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:tps00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    THAPSDRAFT_370 (RIR1_1)
   00240 Pyrimidine metabolism
    THAPSDRAFT_370 (RIR1_1)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    THAPSDRAFT_370 (RIR1_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_370 (RIR1_1)
Enzymes [BR:tps01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     THAPSDRAFT_370 (RIR1_1)
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    THAPSDRAFT_370 (RIR1_1)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone TMP_2 Ly-6_related
Other DBs
NCBI-GeneID: 7442086
NCBI-ProteinID: XP_002289187
JGI: 370
UniProt: B8C161
LinkDB
Position
4:401631..404297
AA seq 813 aa
MYVVKRDGKKQSCQFDKIQSRISKLCYGLDQKFVNEAVISQKVIQGVYPGVTTTELDELA
AQTAASFSTQHPDYAVLAARIEVSNLHKETEKQFSKVVEAFYNYTHPKTGEPAPLVSKEV
YDVVNANKDVLDGAVIHDRDFEFDYFGYKTLEKSYLLKLHGEIAERPQHMLMRVSVGIHM
GDIERVLETYNLLSQRFFTHATPTLFNAGTPNPQMSSCFLTCIKADSIDGIYDTLKNCAV
ISKYAGGIGMSISNVRASASYIRGTNGTSNGIVPMLRVFNNTARYVDQGGGKRKGSIAAY
IEPWHADIFAFLDLRKNHGNEMERARDLFYALWIPDLFMQRVEQNGDWTLMCPNECPGLD
TCWGEEFKTLYEKYEREGKGRKTIKAQQLWFAVLDSQVETGTPYMLYKDSCNRKSNQQNL
GTIKCSNLCTEIVEYTAPDEIAVCNLASISLSKFVTPADNFGGEGHFDLENLKHISKVVT
KNLNRVIDRNFYPVEEARRSNMRHRPIGIGVQGLADAFMMMKLPFESPEARQLNKDIFET
IYFGACEASMELAEQEGPYETYEGSPASKGQLQFDMWGVEPSNLWDWAGLKAKIAQHGMR
NSLLMAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTIVNKHLLRELTANGLWTER
VRNQIIAQGGSVQAVADIPKSIRDVYKTVWEIPQRAILDMAADRGAFICQSQSMNVHIGE
PSTSKLTSMHFYAWKKGLKTGMYYLRTRPKADAIQFTVNQEMLAESTSKPAQDQLERNPS
PTSVTAAGKVSVNSKFAGLQMKDEEEECLNCGA
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgtacgttgtaaagagagacggaaagaagcagagctgccaattcgacaagattcagagc
aggatctcgaagttgtgctatgggcttgatcaaaagtttgtcaacgaggccgtaatctcc
caaaaggtcatccaaggagtgtaccccggcgtaaccaccaccgaactcgacgaactcgcc
gcccaaaccgcagcctccttctctacccaacatcccgactatgccgtcctcgccgcccgc
attgaagtctctaaccttcataaggagaccgagaagcagttctccaaggtcgtggaggcc
ttctacaactacacccatcctaagacgggtgaaccggctcctcttgtgagcaaagaggtg
tacgacgtggtcaatgccaacaaggacgtgttggacggtgctgtcatccacgaccgtgac
ttcgagttcgattacttcggatacaagacattggagaagtcctacctcctcaagttgcac
ggagagatcgccgagcgtccccagcacatgctcatgcgtgtctctgtgggaatccacatg
ggggatattgaacgcgtcttggagacgtataacctcctctcccagaggttcttcacccac
gccacgcctaccctctttaacgctggaacgcccaatcctcaaatgtcgtcttgcttcttg
acgtgcattaaggccgattccattgacggaatctacgatacgctcaagaactgtgccgtc
atcagcaagtatgctgggggaattggcatgtccatctccaacgttcgtgccagcgccagt
tacatccgtggcaccaatgggacctccaacggaatcgtgcccatgctccgtgtcttcaat
aacactgcacgttacgtggatcagggaggtggaaagcgcaagggaagtattgctgcctac
attgagccgtggcatgccgatatctttgccttcttggacttgaggaagaaccatggtaac
gagatggagcgtgcccgcgatctcttctacgctctttggattcctgatttgtttatgcag
agggtagagcagaacggggattggacgttgatgtgtccgaatgagtgccccggattggat
acctgctggggagaggagttcaagactttgtatgagaagtatgagcgtgagggcaaggga
cgcaagaccatcaaggcccagcagctttggtttgctgtgttggattctcaggtggagacc
ggaacaccctacatgttgtacaaagacagctgcaatcgcaaatccaatcaacagaacttg
ggaaccatcaaatgctccaacttgtgtactgagattgtggaatacactgcccctgatgag
attgcggtttgcaacttggctagtatcagtctctccaagtttgtgactcctgctgacaac
tttggaggagagggacactttgacttggagaacctgaagcacatctccaaggtggtgacg
aagaatttgaacagagtcattgatcgcaatttctaccccgttgaggaggccaggaggtcc
aacatgcgccaccgtcctataggaattggtgttcagggattggccgatgcttttatgatg
atgaagctcccctttgaatctcccgaggctcgtcagctcaacaaagacatctttgaaaca
atctactttggagcttgcgaggcgagtatggagcttgccgagcaggagggcccctacgaa
acatatgagggatcgcctgccagtaagggacagcttcagtttgacatgtggggcgtcgaa
cctagcaacctctgggattgggccggtcttaaggcaaagattgctcagcatggcatgcgt
aactctctccttatggctcctatgcctactgcctccaccgctcagatcttgggaaacaat
gagagcacggagccttttacgtccaacatgtacaaccgtcgtgtccttgctggagagttc
actatcgtgaacaaacaccttcttcgcgagttaactgccaatggtttatggactgagagg
gtgcgcaaccagatcattgctcaaggtggatctgtccaggccgtcgccgatatccccaag
agcatccgtgatgtgtacaagaccgtttgggagattccccagagggccatcttggacatg
gctgccgaccgtggcgctttcatctgccagtcgcagagtatgaatgtccacatcggagag
cctagtacctccaagctcacgtcaatgcacttctacgcctggaagaaggggctcaagacc
ggtatgtactacctccgtactcgtcccaaggccgacgccatccaattcaccgtgaaccaa
gagatgcttgccgagagtacgtccaagcctgctcaggatcagctagagaggaatcctagt
cctacctctgttacagctgctggaaaggtcagtgtgaattcaaagtttgctggacttcag
atgaaggatgaggaggaagagtgccttaactgcggagcataa

DBGET integrated database retrieval system