Thalassiosira pseudonana: THAPSDRAFT_37123
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Entry
THAPSDRAFT_37123 CDS
T01078
Symbol
VAT2
Name
(RefSeq) vacuolar proton pump alpha subunit
KO
K02145
V-type H+-transporting ATPase subunit A [EC:
7.1.2.2
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00190
Oxidative phosphorylation
tps01100
Metabolic pathways
tps04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
THAPSDRAFT_37123 (VAT2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
THAPSDRAFT_37123 (VAT2)
Enzymes [BR:
tps01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.2 Linked to the hydrolysis of a nucleoside triphosphate
7.1.2.2 H+-transporting two-sector ATPase
THAPSDRAFT_37123 (VAT2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
ATP-synt_VA_C
ATP-synt_ab_Xtn
ATP-synt_ab_N
Motif
Other DBs
NCBI-GeneID:
7447895
NCBI-ProteinID:
XP_002293455
JGI:
37123
UniProt:
B8CBV3
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Position
13:942706..944571
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AA seq
621 aa
AA seq
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MTEYEKESDYGFIFKVSGPLVVADGMSGSAMYELVRVGHSKLVGEIIKLEGDTASIQVYE
DTSGLTVGDPVLRKKQPLSVELGPGIMGTIFDGIQRPLEHIFQDSGDVYVPKGVDIPCLT
RDVRWTFTPTTIQEGQPVTGGDVIGIVYENEIINSHKILVPPNVYGTVTKLHSTGTDGQE
TFSIDDVVMEVYNESQDKTHYLTLSHFWPVRRPRPIAEKLPGNVPLITGLRVIDGLFPSV
LGGTCAVPGAFGCGKTVISQSLSKFSNSDVIVYVGCGERGNEMAEVLCDFPELTMTIKDE
EGKEKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGMNVSMMGDSTSRWAE
ALREISGRLGEMPADSGYPAYLGARLAAFYERAGRVSCLGSPDREGTVTVVGAVSPPGGD
FSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMQVLEPYFNNMDPRYSYLR
NQARNILQQEDNLSEIVQLVGKESLSEDQKVVMEVAKLIREDFLAQNAFTEHDFTCPLPK
TVGMLSVIITFYDLCQKAIADSPSDAKLTYAHIKTSLAPIIQKVIDSKYVDPKSATADIA
REYAGIVEEMKREFQNLQDGM
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatacgaaaaagaatccgactacggcttcatcttcaaagtctccggacccctc
gtcgtcgccgacggcatgtctggctctgccatgtacgaactagttcgcgtcggacactcc
aagctcgtcggtgaaatcatcaagctcgagggagacaccgcctccatccaggtgtacgag
gacacgagcggtttgaccgtgggagaccccgtgttgaggaagaagcagcctctcagtgtg
gagttgggacctggaattatgggaacgattttcgatggaattcagaggcctttggagcac
atctttcaggactcgggggatgtgtacgttcccaagggtgtggatattccgtgcttgacg
agggatgttcgttggacgtttacccccactaccattcaggagggacagcccgtcactgga
ggagatgtgattggtatcgtgtacgagaatgagattatcaactcgcacaagattttggtt
ccccccaatgtgtacgggactgtgaccaagcttcattccactggtactgatgggcaggag
accttctcgatcgatgatgtggtcatggaggtgtacaatgagagtcaggataagactcat
tacttgacgttgagccacttttggcccgtgcgtcgtcctaggcctattgcggagaaactt
cccggtaatgtgcctttgattactggacttcgtgtcattgacggtctcttcccctccgtg
ttgggtggaacttgtgccgttcctggagcgtttggatgtggaaagactgtgatttctcag
tctctttccaagttctccaacagtgacgtgattgtgtacgtcggatgtggagagcgtggt
aacgagatggcggaggtgctttgtgacttccccgagttgaccatgaccatcaaggatgag
gaaggcaaggagaaggaagttggtatcatgaagcgtaccactcttgtggccaacacctcc
aatatgcccgtggctgcccgtgaagcctccatttacaccggaatcaccctcgctgagtac
ttccgtgatcagggaatgaacgtatccatgatgggtgactctacctctcgttgggctgag
gctcttcgtgagatctctggacgtctcggagagatgcctgccgattcaggataccccgcc
taccttggagctcgtcttgctgccttttacgaacgtgccggacgtgtctcctgtcttgga
tctcccgatcgtgagggtaccgttaccgtggtaggagcagtctctcctcccggtggtgat
ttctccgatcccgttacggctgctactctttccatcgtccaagtcttttggggattggat
aagaagcttgctcagaggaagcactttccctctcttaactggctcatttcgtacaccaag
tacatgcaggttttggagccttacttcaacaacatggaccctcgttactcttaccttcgt
aaccaggctcgtaacattcttcagcaggaggataacctttccgagattgtgcagttggtt
ggaaaggagagtttgtctgaggatcaaaaggttgtcatggaggttgccaagcttatccgt
gaggatttccttgcccagaacgccttcacggagcacgatttcacctgtcctcttcccaag
actgtgggtatgctcagtgttattatcaccttttacgatctttgccagaaggcaattgcc
gactctccctcggatgccaaattgacctacgctcacatcaagacgagcttggctcccatc
atccagaaggtgattgacagtaagtacgttgaccccaagagtgctactgccgatattgcc
cgtgagtatgccggtatcgtggaggagatgaagcgtgagttccagaaccttcaggatggt
atgtaa
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