Thalassiosira pseudonana: THAPSDRAFT_37366
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Entry
THAPSDRAFT_37366 CDS
T01078
Name
(RefSeq) predicted protein
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tps01002
]
THAPSDRAFT_37366
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tps04121
]
THAPSDRAFT_37366
Enzymes [BR:
tps01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
THAPSDRAFT_37366
Peptidases and inhibitors [BR:
tps01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
THAPSDRAFT_37366
Ubiquitin system [BR:
tps04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
THAPSDRAFT_37366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Peptidase_C98
Actin_micro
Motif
Other DBs
NCBI-GeneID:
7452721
NCBI-ProteinID:
XP_002293964
JGI:
37366
UniProt:
B8CCM4
LinkDB
All DBs
Position
14:complement(711254..711805)
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AA seq
169 aa
AA seq
DB search
IFGGTYLYTTKCSDCGTTSERRENFMDISLPIDISNDVDVKRCLDSYTRPEFLDGDNQYL
CSGCNKKNDAVRSLVFERLPPVLNLQLARYVFDYESYNKKKISTKVLLPRTLEVSRASSN
SNDDKSVYILCAVQNHLGTSAHGGHYVAECLDWMTGLWYEFNDDEVKLL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atcttcggagggacttatttatacacaacaaagtgctctgattgtggaaccacatcggag
aggagagagaatttcatggacatctctctccctattgacatttccaatgacgtggatgtt
aagcgttgccttgattcctatacccgtcccgaattcctcgacggcgacaaccaatatctc
tgctctgggtgcaacaaaaagaatgatgcagtgagaagtttggtatttgaaaggttgcct
cctgttctcaatctacaattggcacgatacgtctttgactatgagtcgtacaataagaag
aagatatcaaccaaagtgttgctgcctcgaactctggaggtgtctagagcaagctctaat
agcaacgacgacaaatcagtctacattctgtgtgctgttcagaatcatcttggaacttct
gcacacggtggacattacgttgccgaatgcctagattggatgacgggattgtggtacgag
ttcaacgacgacgaagtaaaactgctc
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