Thalassiosira pseudonana: THAPSDRAFT_37374
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Entry
THAPSDRAFT_37374 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tps03016
]
THAPSDRAFT_37374
Enzymes [BR:
tps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THAPSDRAFT_37374
Transfer RNA biogenesis [BR:
tps03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THAPSDRAFT_37374
Prokaryotic type
THAPSDRAFT_37374
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Thioredoxin_10
Peptidase_U57
Motif
Other DBs
NCBI-GeneID:
7451590
NCBI-ProteinID:
XP_002294000
JGI:
37374
UniProt:
B8CCU3
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All DBs
Position
14:complement(900913..902623)
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AA seq
186 aa
AA seq
DB search
MMKVGHGGTLDPLASGVLVLGIGKGTTQLQSYLEGDKQYVAVCELGYETTTLDAEGDVVK
EMEWAHVKSVKGGSDSDSTNTSSVEGVLSKFQGKIQQVPPLYSAIRVDGKRLYEIARKGD
VNSDDVEIPTREVEVYGVKAYNCTLELPQFALEVQCGGGTYIRSLVRDIGYELDTVATMT
GLVRTK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggtgggacacgggggtacattggatccacttgctagtggtgtattagtccta
ggaattggcaagggtaccactcaactacagagttatttggagggggataaacagtacgtg
gcagtgtgtgagttaggatacgaaactactacgttggatgcagagggagatgttgtgaag
gagatggagtgggctcatgtcaagagtgtgaaaggtgggagtgatagtgatagtaccaac
accagcagtgtagagggggtgttgtcaaagtttcaaggaaagattcagcaagttcctcct
ttgtacagtgccatcagagttgatggaaagcggttgtatgagattgcgagaaagggagat
gtcaatagtgacgatgtggagattccaacgcgtgaagtggaggtatatggagtcaaggcg
tacaattgtaccttggagttacctcaattcgcactggaagttcaatgcggaggagggacc
tacatacgttctctcgtgcgagacatcgggtacgagttagacactgtagccacaatgact
ggattggtgcgaacgaag
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