KEGG   Thalassiosira pseudonana: THAPSDRAFT_37374
Entry
THAPSDRAFT_37374  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tps03016]
    THAPSDRAFT_37374
Enzymes [BR:tps01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     THAPSDRAFT_37374
Transfer RNA biogenesis [BR:tps03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    THAPSDRAFT_37374
 Prokaryotic type
    THAPSDRAFT_37374
SSDB
Motif
Pfam: TruB_N TruB_C_2 Thioredoxin_10 Peptidase_U57
Other DBs
NCBI-GeneID: 7451590
NCBI-ProteinID: XP_002294000
JGI: 37374
UniProt: B8CCU3
LinkDB
Position
14:complement(900913..902623)
AA seq 186 aa
MMKVGHGGTLDPLASGVLVLGIGKGTTQLQSYLEGDKQYVAVCELGYETTTLDAEGDVVK
EMEWAHVKSVKGGSDSDSTNTSSVEGVLSKFQGKIQQVPPLYSAIRVDGKRLYEIARKGD
VNSDDVEIPTREVEVYGVKAYNCTLELPQFALEVQCGGGTYIRSLVRDIGYELDTVATMT
GLVRTK
NT seq 558 nt   +upstreamnt  +downstreamnt
atgatgaaggtgggacacgggggtacattggatccacttgctagtggtgtattagtccta
ggaattggcaagggtaccactcaactacagagttatttggagggggataaacagtacgtg
gcagtgtgtgagttaggatacgaaactactacgttggatgcagagggagatgttgtgaag
gagatggagtgggctcatgtcaagagtgtgaaaggtgggagtgatagtgatagtaccaac
accagcagtgtagagggggtgttgtcaaagtttcaaggaaagattcagcaagttcctcct
ttgtacagtgccatcagagttgatggaaagcggttgtatgagattgcgagaaagggagat
gtcaatagtgacgatgtggagattccaacgcgtgaagtggaggtatatggagtcaaggcg
tacaattgtaccttggagttacctcaattcgcactggaagttcaatgcggaggagggacc
tacatacgttctctcgtgcgagacatcgggtacgagttagacactgtagccacaatgact
ggattggtgcgaacgaag

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