Thalassiosira pseudonana: THAPSDRAFT_37430
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Entry
THAPSDRAFT_37430 CDS
T01078
Name
(RefSeq) predicted protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
tps
Thalassiosira pseudonana
Pathway
tps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
THAPSDRAFT_37430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tps03041
]
THAPSDRAFT_37430
03032 DNA replication proteins [BR:
tps03032
]
THAPSDRAFT_37430
Spliceosome [BR:
tps03041
]
Complex A
U1 snRNP components
Sm proteins
THAPSDRAFT_37430
U2 snRNP components
THAPSDRAFT_37430
Complex B
U1 snRNP components
THAPSDRAFT_37430
U4/U6.U5 tri-snRNP components
THAPSDRAFT_37430
Complex C
U2 snRNP components
THAPSDRAFT_37430
DNA replication proteins [BR:
tps03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
THAPSDRAFT_37430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Rad21_Rec8_N
Motif
Other DBs
NCBI-GeneID:
7441797
NCBI-ProteinID:
XP_002293962
JGI:
37430
UniProt:
B8CCM0
LinkDB
All DBs
Position
14:complement(698489..699191)
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AA seq
108 aa
AA seq
DB search
MSEEAPTNDLKSGPFSVLFKAVKGNTQVLVNVRNNHKLLGRVKAYDRHMNLLLEDVKEMW
TEYSKGGKGRKRGTSINKDRYVSKMFLRGDSVILVVSNPAALTGGASS
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagaagcacccacaaacgatctcaaatcaggacccttcagtgtcctctttaaa
gccgtaaagggaaacacgcaggtgttggtcaatgtgagaaataatcacaagttgttgggg
agggtcaaggcgtatgatagacatatgaatttactactagaagacgtgaaggagatgtgg
accgaatactccaaagggggtaagggacgaaagcgtggaacatcaatcaataaagatcga
tatgtgagtaagatgtttttaaggggggattcggtaatattggtggttagtaatcctgct
gcattgacggggggtgctagttcttaa
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