KEGG   Thalassiosira pseudonana: THAPSDRAFT_37430
Entry
THAPSDRAFT_37430  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
tps  Thalassiosira pseudonana
Pathway
tps03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    THAPSDRAFT_37430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tps03041]
    THAPSDRAFT_37430
   03032 DNA replication proteins [BR:tps03032]
    THAPSDRAFT_37430
Spliceosome [BR:tps03041]
 Complex A
  U1 snRNP components
   Sm proteins
    THAPSDRAFT_37430
  U2 snRNP components
    THAPSDRAFT_37430
 Complex B
  U1 snRNP components
    THAPSDRAFT_37430
  U4/U6.U5 tri-snRNP components
    THAPSDRAFT_37430
 Complex C
  U2 snRNP components
    THAPSDRAFT_37430
DNA replication proteins [BR:tps03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     THAPSDRAFT_37430
SSDB
Motif
Pfam: LSM Hfq Rad21_Rec8_N
Other DBs
NCBI-GeneID: 7441797
NCBI-ProteinID: XP_002293962
JGI: 37430
UniProt: B8CCM0
LinkDB
Position
14:complement(698489..699191)
AA seq 108 aa
MSEEAPTNDLKSGPFSVLFKAVKGNTQVLVNVRNNHKLLGRVKAYDRHMNLLLEDVKEMW
TEYSKGGKGRKRGTSINKDRYVSKMFLRGDSVILVVSNPAALTGGASS
NT seq 327 nt   +upstreamnt  +downstreamnt
atgtcggaagaagcacccacaaacgatctcaaatcaggacccttcagtgtcctctttaaa
gccgtaaagggaaacacgcaggtgttggtcaatgtgagaaataatcacaagttgttgggg
agggtcaaggcgtatgatagacatatgaatttactactagaagacgtgaaggagatgtgg
accgaatactccaaagggggtaagggacgaaagcgtggaacatcaatcaataaagatcga
tatgtgagtaagatgtttttaaggggggattcggtaatattggtggttagtaatcctgct
gcattgacggggggtgctagttcttaa

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