Thalassiosira pseudonana: THAPSDRAFT_37740
Help
Entry
THAPSDRAFT_37740 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tps02000
]
THAPSDRAFT_37740
Transporters [BR:
tps02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
THAPSDRAFT_37740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
7444312
NCBI-ProteinID:
XP_002294204
JGI:
37740
UniProt:
B8CD74
LinkDB
All DBs
Position
15:complement(275121..276612)
Genome browser
AA seq
407 aa
AA seq
DB search
MQKLHIDAAALGVMFLNVVALSPGFGLLTAMDTLCSQAHGANQTTKMGTYSLTGFFILTS
VFFLSSVILWNASSVLILLGQPPIVAQLAGEFVRYLLPGLPFVYAYELIRKVSQSRNEAM
PMLISSIVCNVVVVCLGYYLVHYTTMGWYGAAVARSVGNAVLVPVIILGMVMGWGGAALS
AKALIEFLALGFPGMLQMMFEWVAFEVIALLCGVLPGKEAIIGIGANAVIMNVSSMGYML
YLGVSVSGNVRIGNALGAGDAHRAEIASYLTLGAGTLMSMINITILLTFRKSLPCFFTTD
LEIIEKAQHLFIIAAVFQFPDALNACAQGIFRGSGRQALAAKLNFCAYYVIGIPLGIVLG
IKLQWGVGGLWWGMTAGLCTIAVVGSFIIVKSNWSKLTSQAQERINS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaacttcacatcgacgcggcagcactcggggtaatgtttctcaacgtcgtggcc
ctctcgcccggctttggtctcctcacagcgatggatacgttgtgctcgcaagcacatggt
gccaatcaaacaaccaagatgggaacatattcgctcaccggattctttattctaacttcg
gtcttctttttgagtagtgtgatattatggaatgcatcgtcggtgttgatattattggga
cagcctccgatagtggctcaattggctggggagtttgttcgataccttttgcctggacta
ccgttcgtgtatgcctatgagctgatacgaaaagtatctcagtctagaaacgaggctatg
ccaatgcttatttcatccattgtgtgcaacgtcgtggtggtttgtttgggatactacctg
gtgcattatacgacaatgggctggtacggagcggcggttgccaggtctgtggggaatgca
gtgttggttcctgtgattatattggggatggtcatgggatggggtggtgcggcattgagt
gccaaggcattgattgaattccttgccttgggctttccgggcatgttgcaaatgatgttt
gagtgggttgcttttgaagtgattgcactcctctgtggagtacttccaggaaaagaagca
atcattggaatcggagctaatgcagtcattatgaacgtatcttcaatggggtacatgctt
tatctcggcgttagcgtatcaggcaacgttcgtattggcaatgcactcggagcaggcgac
gcccacagagccgagattgcatcgtatctgactttgggagctggaacgttgatgtcgatg
atcaacattacaattttgttgacttttagaaagtctctgccgtgtttctttacaaccgac
ttggaaatcattgagaaggcacagcacctcttcatcattgcagcagtctttcagttcccc
gatgctttaaatgcttgtgctcagggaatctttcgggggagtggacgacaagcactggct
gcaaagctaaatttttgtgcgtattacgtcattggaattcctttggggatcgttctcggg
atcaagttgcagtggggagtaggcgggctgtggtggggtatgactgctggactgtgtacg
attgcggttgttggctcgttcataatagtcaagagcaattggagcaagttgacgtcgcaa
gcacaagagaggataaacagctag
DBGET
integrated database retrieval system
