Thalassiosira pseudonana: THAPSDRAFT_37790
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Entry
THAPSDRAFT_37790 CDS
T01078
Name
(RefSeq) predicted protein
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
THAPSDRAFT_37790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tps03021
]
THAPSDRAFT_37790
03110 Chaperones and folding catalysts [BR:
tps03110
]
THAPSDRAFT_37790
Enzymes [BR:
tps01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
THAPSDRAFT_37790
Transcription machinery [BR:
tps03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
THAPSDRAFT_37790
Chaperones and folding catalysts [BR:
tps03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
THAPSDRAFT_37790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
X8
DUF6895
SKA2
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
7449954
NCBI-ProteinID:
XP_002296831
JGI:
37790
UniProt:
B8LCS5
LinkDB
All DBs
Position
16
Genome browser
AA seq
122 aa
AA seq
DB search
DNPKEVRVLHILKKHSSSRRPSSWRQSKITITKPQAIAELHELLSILQEVKSNPKELRAT
FEELAKTESDCSSAKRGGDLGFFGRKKMQPAFEKASFDLGVGELTEEVVDTSSGVHIILR
LA
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
gacaaccccaaagaagtacgagttctccacattctcaaaaagcattcctcctcccgtcgt
ccctcctcctggcgccaatccaaaatcacaatcaccaaaccccaagccattgccgaactc
cacgaactcctctccatactccaagaggttaaatccaaccccaaagaattacgagctacc
tttgaagaattggccaagaccgaaagcgactgcagtagtgccaagcgcgggggagatttg
ggattttttggaaggaagaagatgcaacctgcgtttgagaaggctagttttgacttgggg
gtgggggagttgacggaggaggttgtggatactagtagtggtgttcatattatattgaga
ctggcgtag
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