KEGG   Thalassiosira pseudonana: THAPSDRAFT_37790
Entry
THAPSDRAFT_37790  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K09578  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
Organism
tps  Thalassiosira pseudonana
Pathway
tps03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    THAPSDRAFT_37790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tps03021]
    THAPSDRAFT_37790
   03110 Chaperones and folding catalysts [BR:tps03110]
    THAPSDRAFT_37790
Enzymes [BR:tps01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     THAPSDRAFT_37790
Transcription machinery [BR:tps03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     THAPSDRAFT_37790
Chaperones and folding catalysts [BR:tps03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Parvulin
    THAPSDRAFT_37790
SSDB
Motif
Pfam: Rotamase Rotamase_3 X8 DUF6895 SKA2 AIR2-like_ZnK4
Other DBs
NCBI-GeneID: 7449954
NCBI-ProteinID: XP_002296831
JGI: 37790
UniProt: B8LCS5
LinkDB
Position
16
AA seq 122 aa
DNPKEVRVLHILKKHSSSRRPSSWRQSKITITKPQAIAELHELLSILQEVKSNPKELRAT
FEELAKTESDCSSAKRGGDLGFFGRKKMQPAFEKASFDLGVGELTEEVVDTSSGVHIILR
LA
NT seq 369 nt   +upstreamnt  +downstreamnt
gacaaccccaaagaagtacgagttctccacattctcaaaaagcattcctcctcccgtcgt
ccctcctcctggcgccaatccaaaatcacaatcaccaaaccccaagccattgccgaactc
cacgaactcctctccatactccaagaggttaaatccaaccccaaagaattacgagctacc
tttgaagaattggccaagaccgaaagcgactgcagtagtgccaagcgcgggggagatttg
ggattttttggaaggaagaagatgcaacctgcgtttgagaaggctagttttgacttgggg
gtgggggagttgacggaggaggttgtggatactagtagtggtgttcatattatattgaga
ctggcgtag

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