Thalassiosira pseudonana: THAPSDRAFT_37819
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Entry
THAPSDRAFT_37819 CDS
T01078
Name
(RefSeq) predicted protein
KO
K12189
ESCRT-II complex subunit VPS25
Organism
tps
Thalassiosira pseudonana
Pathway
tps04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
THAPSDRAFT_37819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_37819
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_37819
Membrane trafficking [BR:
tps04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
THAPSDRAFT_37819
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
THAPSDRAFT_37819
Exosomal proteins of colorectal cancer cells
THAPSDRAFT_37819
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ESCRT-II
Motif
Other DBs
NCBI-GeneID:
7442556
NCBI-ProteinID:
XP_002296748
JGI:
37819
UniProt:
B8LCR9
LinkDB
All DBs
Position
16
Genome browser
AA seq
178 aa
AA seq
DB search
TATTSSRQLPDFYHFPPFFTIQPVLSTREKQLGQWRELILKYHTDLKIKTLVLHECPLWK
NANIGRELNAEEILVVVDDFVKSGHGEWEDPNQRTRCRILWRKPEQLASDVYEWAVANGY
IGSVCTVYELHSGEDVNGMSFQGADEELLRRALGILEEQEKCTIFKGETSSEDGIKFR
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
accgcaacaacgtcatctcgtcagctgccagatttctaccactttccgccttttttcaca
atccaacctgtgttatctacgagagagaaacagttgggccaatggagggagttgattctg
aagtatcacacggatctaaagataaaaacattggtactgcacgaatgtccattatggaag
aatgcaaatattggaagagagttgaatgccgaggagattttggttgttgtggacgacttt
gtaaagagcggacacggagaatgggaagatccaaaccaaagaacacgatgtcgcattcta
tggagaaaaccagaacaacttgcttcagatgtatatgaatgggctgtggcaaatggatac
attggtagtgtttgtaccgtgtatgagcttcatagcggcgaagatgtcaatggaatgtca
ttccagggagcagatgaagaactgttacgtagagctttggggatattggaagagcaagag
aagtgtacaatattcaaaggggagacgtcgtccgaagatggcatcaaattccgttga
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