KEGG   Thalassiosira pseudonana: THAPSDRAFT_3787
Entry
THAPSDRAFT_3787   CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K02321  DNA polymerase alpha subunit B
Organism
tps  Thalassiosira pseudonana
Pathway
tps03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    THAPSDRAFT_3787
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tps03032]
    THAPSDRAFT_3787
DNA replication proteins [BR:tps03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    THAPSDRAFT_3787
SSDB
Motif
Pfam: DNA_pol_E_B DPOA2_OB Metallophos_3 Pol_alpha_B_N
Other DBs
NCBI-GeneID: 7449563
NCBI-ProteinID: XP_002288990
JGI: 3787
UniProt: B8BYS5
LinkDB
Position
3:complement(1799728..1802017)
AA seq 719 aa
MTSTLKNEITSAFTTVGLTSLPAPLVTKLTGLSTSLRLTPRQLAEAWEAHSLTRNVDVLD
DVTFGGYQSALAKEAESKGLIASSSVDSKRNVVVMQSSGLGKRTAPHSSVTPSPMAKRGA
QTPQSASGATAPADRSGLSAVDNLTTPSGKVPISPGMKHPGVASANQITPTAKSAPKYQD
RTGTGSLVTSYNPNSLPTAVEVNAQNADNATTQKTCTIQYHPSSTHPQPPTKSTPFRHMF
TPLATRAKALESRILTMSDSICEKYNIKSEEEEMLKYEHVSAEVVDDNMACWTPVGIPKQ
GKVVCVGRICNEAHEGRLNRASIRLEGSRKDSSGSRIHLDLNSLVTNNDNNQSYSFFPGQ
IVAVEGINSSGRTMQASRLYEGVPPPVEKSTAKELIKYNYGPDGQNGMPLSIVSMCGPFT
TKDNLEYDPLVDMVMKISEDQPDVVIMCGPFVDGRQPLVQGGEPTITDEDGNEKKVSYEN
LFQTKFAALLEEMYANDPDMKTQFVLVPSTEDMICESVYPQPPLVNQEVTSGVKKFNDEF
GNLGLNYVEIAGRENIKTSERTKRVHCVSNPCTLKINELSVGVTSSDVLFHISSDETNAN
LPPGGRLTRIAQHLIQQRSYYPLFPAAKGACLDLSRSDEWEMPVQPDILIVPSKLTTFAR
KVLDTTVVVNPGELTKNTTGGTYAVIDVHPMKKEALEKGGDAEMEHGVQDRVRVDIKRI
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgacatccaccctcaaaaacgaaataacctccgccttcaccaccgtaggcctcacctcc
ctcccagcacccctggtaaccaaactcactggcctctccacctcgctacgcctcacaccc
agacaactcgccgaggcatgggaggctcattcactcacacgtaatgtggacgtgttggac
gatgtcacattcggtggatatcagagtgccttggccaaggaggccgagagcaaaggactc
attgcttcgtcatcagtggacagtaagcgtaatgtggtggtgatgcagagctcaggattg
ggcaagcgtacggctcctcattcgagcgtgacgccttctccgatggcaaagaggggagcg
cagacgcctcagtctgcgagtggcgcgaccgctcctgccgatcgcagtggactctcggcg
gtggataatcttaccacgccctcgggaaaggtgcccatttcgccagggatgaagcatcca
ggagttgcatcggccaatcagataacacccactgccaaatcagcacccaaataccaagac
cgtaccgggaccggatcattggtcacctcctacaatccaaacagtctacccaccgcagta
gaagtcaatgcccaaaacgctgacaatgccactactcaaaagacatgcaccatccaatac
catccctcctccacccatcctcaaccaccgaccaaatccaccccctttcgacacatgttc
acccccctcgcgacacgtgccaaggcgctcgaatcacgcatcttgaccatgagtgattcc
atttgcgaaaagtacaatattaagagtgaggaggaggagatgttgaagtatgaacatgtg
agtgcggaggtcgtggatgataatatggcgtgttggactccggtgggaattcctaagcaa
gggaaggttgtttgtgttggaaggatttgcaatgaggctcacgagggaagactcaaccgt
gcctccattcgtctcgaaggctctcgcaaagactcctccggatcccgtattcaccttgat
ctcaactccctcgttaccaacaatgacaacaaccaaagctactccttctttccaggtcaa
attgttgcagtagaaggaatcaactcctcgggaaggactatgcaagcctcgcgtttatat
gaaggtgttcctcctccggttgaaaagagcacggcgaaagagttgattaagtacaactac
ggaccggatggccagaacggtatgcctttatcgatcgtttccatgtgtggaccgtttact
acgaaggataacttggagtatgatcctttggtggatatggtgatgaagatttcggaggat
cagccagatgtagtcatcatgtgtggtcctttcgtggatgggaggcagcccttggtgcag
ggaggagaacctacaattacggacgaagacggcaacgaaaagaaggtcagctacgagaat
ctatttcagacgaagtttgcggcattgttggaggagatgtacgccaatgaccctgacatg
aagacacagtttgtgttggtgcctagcacagaggatatgatctgtgagtcggtgtatcct
cagcctccacttgtgaatcaggaggtgacgagcggtgtgaaaaagttcaacgatgagttc
ggcaacttgggattgaactatgtggagatcgctggaagggaaaatatcaagactagtgag
aggaccaagcgtgtacactgcgtgtccaacccttgtactctcaaaatcaacgagctctcg
gttggagtcacctcgtcagatgttttgttccacattagttcggatgagaccaatgccaac
ctccctcctggaggtcgtctgactcgcattgctcagcacttgatccaacagaggagttac
tacccactctttccagctgccaagggagcatgtcttgatttatctcgttccgacgaatgg
gaaatgccagtgcaacctgatattcttattgtaccatccaaacttaccacgttcgcgagg
aaagtgctggacactaccgtggtggtgaatcctggagagttgactaagaataccactgga
ggaacgtacgctgtgattgatgtccatccaatgaagaaggaggcgttggagaaggggggt
gatgctgagatggaacatggggttcaggatagggttagggtcgatatcaagcgcatttga

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