Thalassiosira pseudonana: THAPSDRAFT_37965
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Entry
THAPSDRAFT_37965 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_37965
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
90S particles
Other 90S particles
THAPSDRAFT_37965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
HAT_Syf1_CNRKL1_C
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_19
HAT_PRP39_N
FTO_CTD
TPR_16
ARM_TT21_5th
Big_3
Motif
Other DBs
NCBI-GeneID:
7444198
NCBI-ProteinID:
XP_002294474
JGI:
37965
UniProt:
B8CE26
LinkDB
All DBs
Position
17:complement(252637..253555)
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AA seq
259 aa
AA seq
DB search
NSSEVWIKYMAFHLSLADIDSARTVANRAFERIVFREEGEKLNVWTALLTLELKYGNDKS
LQATVDRACKQNNPKQASSIGSNDLVTSTKRADDMFTKMCKKFKSKKTVWIAHFQYLLKG
SRHEEAHALLKRSLQSLPNYKHVEVMSKFAQMEFELGSAERGRTIFNALLEKHPKRMDLL
FVNIDKEIKSGDILKARALFDSVVNPVSNERKQKFKFSDKQMKSLFKKWYRMEEEHGDEE
SQERVKEEARTFVVKSKGG
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
aacagctccgaggtgtggatcaagtacatggcattccatttatctcttgctgatattgat
agtgctcgcactgttgccaaccgtgcatttgaaaggattgtattcagggaggaaggggag
aagcttaatgtctggactgcattgcttacgcttgagctgaagtatggtaacgacaaatct
ttgcaagcaactgtcgatcgtgcatgcaaacagaacaacccgaagcaagcgtcgtccatt
ggctcaaacgatcttgttacttccaccaaacgtgcggacgatatgtttactaagatgtgc
aagaagttcaagagcaaaaagactgtctggattgctcacttccaatacttgctgaagggg
tctcgacacgaggaagctcatgctcttctcaagagatcgctccagagccttccaaactac
aaacacgtggaggttatgtctaagtttgctcagatggagttcgagctcggcagtgccgaa
cgtggacgtactatattcaatgcactacttgaaaagcatccaaagagaatggacttgttg
tttgtgaacattgataaagagatcaaaagtggagatattctgaaggctcgtgccttgttt
gatagtgtggtgaatccagtgtcaaatgagcgtaaacagaagtttaagttcagtgacaag
caaatgaagagtcttttcaagaagtggtatcgcatggaggaagaacacggggacgaagag
agccaagaacgtgtcaaggaggaagctaggacttttgttgttaaatcaaagggtgggtaa
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