Thalassiosira pseudonana: THAPSDRAFT_38011
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Entry
THAPSDRAFT_38011 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03097
casein kinase II subunit alpha [EC:
2.7.11.1
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THAPSDRAFT_38011
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tps01001
]
THAPSDRAFT_38011
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_38011
Enzymes [BR:
tps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
THAPSDRAFT_38011
Protein kinases [BR:
tps01001
]
Serine/threonine kinases: Other
CK2 family
THAPSDRAFT_38011
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
90S particles
Kinase
THAPSDRAFT_38011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
7444233
NCBI-ProteinID:
XP_002294508
JGI:
38011
UniProt:
B8CE95
LinkDB
All DBs
Position
17:complement(438392..439944)
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AA seq
325 aa
AA seq
DB search
YRLTRRLGSGKFSDVFEAVDVEWEKKCIDGGCLKPISERKIRRELLVLTHCATLPNLARL
IGILNSQRSNNIGGNDSLMNYDKNNSHDARNEYYLCHLLIALDGLHSAGIMHRDVKPRNC
LINRFPREQPNYSHGDGSSSTQQHMPQPLPPPPLMLVDLGLADFYLPGKEFNVRVASRHY
KSPELLIGFQYYDYAIDLWSVGCILAGLLFRREPFFRGKDNEEQLALIVSVLGTRDFLPY
CRKCNVRLSSKSRAAIGKYCSESLEEGSVARDIGRRKPWLSFLTPTCPIPSPQALDLLDK
LLVYDHEQRWTAREALSHSFFDDVR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
tatcgccttacccgaagactcggttctggtaaattctccgacgtatttgaagcagtggat
gttgaatgggagaagaaatgtattgatggtggttgcctcaagccaatctctgaacgaaag
atacgacgagagttgttagtattgactcattgtgcaacattaccaaatcttgcgagattg
atcggaattttgaacagccaacgcagcaacaacattggaggaaatgattctctgatgaac
tacgacaagaacaacagtcacgatgcacgaaatgaatactatctatgccatctactcata
gcactagatgggcttcattcggctggcatcatgcatcgagatgtaaagccgaggaattgc
ctgattaatcgttttcctcgagagcagcccaattattcacatggggacggttcatcgtca
acgcaacaacacatgccacaaccactgcctcctccaccgctcatgctggtggatcttggt
cttgctgacttttatctgccgggaaaggaattcaacgttcgtgtagcatcaagacattac
aaaagtccggaactattgattggatttcaatactacgattatgccattgatctgtggagc
gtgggatgcatcctcgctggactgctgtttcgacgagaaccattctttagaggaaaggac
aacgaagagcagctggcattgatcgtcagcgttttaggcacgcgggactttttaccttat
tgccgcaagtgcaatgttagactctcttcgaagtcacgtgcagctattgggaagtattgc
tcagaatcactggaagaaggatctgttgctagagatattggaagaagaaagccgtggcta
tcattcctcactccaacgtgtccaatacccagcccccaagctttggatctgctggataaa
ctcttggtgtacgatcacgaacaacgatggacggcgagagaagcattgagtcattccttt
ttcgacgacgttcgt
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