Thalassiosira pseudonana: THAPSDRAFT_3815
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Entry
THAPSDRAFT_3815 CDS
T01078
Symbol
Lhca6
Name
(RefSeq) member of fucoxanthin chlorophyll a/c family, lhca clade
KO
K08907
light-harvesting complex I chlorophyll a/b binding protein 1
Organism
tps
Thalassiosira pseudonana
Pathway
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
tps00194
]
THAPSDRAFT_3815 (Lhca6)
Photosynthesis proteins [BR:
tps00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCI
THAPSDRAFT_3815 (Lhca6)
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Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
7452050
NCBI-ProteinID:
XP_002289005
JGI:
3815
UniProt:
B8BYV3
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Position
3:complement(1870428..1871300)
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AA seq
219 aa
AA seq
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MMKITVLTLLAGSAYSFCPAANSVRSSALNAEKSQAMPFLNKPALLDGSMAGDKGFDPLG
LSTIDDVGIDLYWLREAEIKHARVAMLAVAGALQVEVFGPAPGCEMATAKCQTDAFWQIW
SAHPQYIAASLVLITIVEAVSGIAATTGRESGDRAPGDFGLDPLGFCNGDVAKADRLKLQ
EIENGRLAMWAAMGLLVQGSTNHMGGLEALGAALNDNSF
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagattaccgttcttactctccttgccggatcggcttactccttctgtcctgcc
gccaactcggttaggtcttctgctttgaatgctgagaagagtcaggctatgcctttcttg
aacaagcctgctctccttgacggatccatggctggagataaaggatttgatcctcttggc
ctttctacaattgacgatgtcggaattgatctgtactggcttcgcgaggctgagatcaag
cacgctcgtgtcgccatgttggctgtcgcaggtgctttgcaagttgaggtctttggacca
gcacctggatgtgaaatggccactgccaaatgccagacagatgcattctggcaaatctgg
agtgctcacccacaatatattgctgcttcgttggtcttgattacgattgttgaggcggtg
tctggaattgctgcgaccactggacgtgaatctggagaccgtgctcctggtgacttcgga
cttgatcctctaggattctgcaatggagatgttgccaaggcggataggcttaagttgcaa
gagattgagaatgggcgtcttgctatgtgggcagctatgggacttcttgtacagggaagc
actaatcacatgggaggacttgaggcactcggagctgctttgaacgacaactcgttctaa
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