Thalassiosira pseudonana: THAPSDRAFT_3816
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Entry
THAPSDRAFT_3816 CDS
T01078
Symbol
Lhcr7
Name
(RefSeq) fucoxanthin chl a/c light-harvesting protein
KO
K08907
light-harvesting complex I chlorophyll a/b binding protein 1
Organism
tps
Thalassiosira pseudonana
Pathway
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
tps00194
]
THAPSDRAFT_3816 (Lhcr7)
Photosynthesis proteins [BR:
tps00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCI
THAPSDRAFT_3816 (Lhcr7)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
PT-VENN
Motif
Other DBs
NCBI-GeneID:
7445348
NCBI-ProteinID:
XP_002288517
JGI:
3816
UniProt:
B8BYV4
Structure
PDB
PDBj
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All DBs
Position
3:1871607..1872251
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AA seq
214 aa
AA seq
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MMKIAALSLLAAGSASAFAPASNSVKSSALNAERSPSLPFMNKPALLDPSMPGYKGFDPL
GLSNIDDVGIDLYWLREAEIKHARVAMLAVAGAVWVEAFGPAPGCEAATAKNQMDAFWQI
WNSHPQYIAASLVFIMIAEAVSGISTTTGRESGEREPGFFGFGSNFPKTDADMKKMQDKE
LENGRLAMWAAMGLIFQGSANHMGGLEALGATFN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagattgccgccctctccctacttgccgccggatcggccagtgccttcgcacct
gcctccaactcggtcaagtcttccgccttgaacgccgagaggagcccatctcttcctttc
atgaacaagcctgctcttcttgacccttccatgcccggatacaagggatttgaccccctt
ggtctctccaacattgatgatgtcggaatcgatctttactggcttcgcgaggctgagatc
aagcacgctcgtgttgccatgttggctgttgccggagctgtttgggttgaggccttcgga
cctgcccctggatgtgaggctgccaccgcaaagaatcaaatggacgccttctggcaaatc
tggaactctcacccacaatacatcgctgcttcgttggtttttattatgattgctgaggcc
gtatctggaatttctactaccactggacgtgaatctggagagcgtgaacccggtttcttt
ggatttggatctaacttccctaagacggatgctgacatgaagaagatgcaagacaaggag
cttgagaatggacgccttgctatgtgggctgctatgggacttatcttccagggaagcgct
aaccacatgggaggactcgaggcactcggagccactttcaactaa
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