Thalassiosira pseudonana: THAPSDRAFT_38945
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Entry
THAPSDRAFT_38945 CDS
T01078
Name
(RefSeq) predicted protein
KO
K20280
trafficking protein particle complex subunit 5
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_38945
Membrane trafficking [BR:
tps04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
THAPSDRAFT_38945
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
TRAPP complex I
THAPSDRAFT_38945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPP
Ribosomal_L44
Motif
Other DBs
NCBI-GeneID:
7445250
NCBI-ProteinID:
XP_002285968
JGI:
38945
UniProt:
B8BSU9
LinkDB
All DBs
Position
1:186155..187381
Genome browser
AA seq
199 aa
AA seq
DB search
MNRSSSNILDRPLGRSGGRGGSTSEGTLVSLSAFAYIYSELVQYHQGRAASISELERRLE
SAGYGVGLKVLEMVAYRAKETKRETRLMSILHFVSSSVWKSLFGKAADSLERSIDNSDEF
MIIDYEPITSTFVSVPTDLGQLSADAYVSGIIAGVLDGAGFTARVTAHSVKVEEGEKDKA
VFLVKFSSEVLTRDAALER
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaatagatcatcttccaatatcttagatcgtccacttggacgatcgggaggacgagga
gggagtacctcggaaggaacactcgtctccctcagcgcctttgcctacatttactcggaa
ctggtgcaatatcatcaaggacgtgcggctagtatatcggagttggaaagacggttggag
agtgcagggtatggagttggattgaaggtgttggagatggttgcttatcgggcgaaggag
acaaagagagaaacacgcctcatgtccatcctccacttcgtgtcctcctccgtttggaaa
tctctctttggcaaagcagccgactccctcgaacgaagtatcgataactccgacgaattc
atgattatcgactacgaaccaatcacatcgacatttgtctctgttcctaccgatttaggc
caattgagcgccgatgcctatgtgagcggtatcatcgcgggtgtgttggatggagctggg
tttacggctagggtgactgctcatagtgtcaaggtggaggagggggaaaaggataaggct
gtgtttttggtcaagttcagttcggaggtgttgacgagggatgctgctttggagagatag
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