Thalassiosira pseudonana: THAPSDRAFT_39157
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Entry
THAPSDRAFT_39157 CDS
T01078
Symbol
RPT2
Name
(RefSeq) 26S proteasome ATPase regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
tps
Thalassiosira pseudonana
Pathway
tps03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
THAPSDRAFT_39157 (RPT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tps03051
]
THAPSDRAFT_39157 (RPT2)
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
THAPSDRAFT_39157 (RPT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_22
DUF815
nSTAND3
AAA_16
AAA_2
RuvB_N
Prot_ATP_ID_OB_N
TIP49
ATPase
RNA_helicase
AAA_24
AAA_28
AAA_3
AAA_25
Sigma54_activat
AAA_14
TsaE
Mg_chelatase
NACHT
AAA_18
NB-ARC
Parvo_NS1
AAA_7
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
7442902
NCBI-ProteinID:
XP_002286831
JGI:
39157
UniProt:
B8BR56
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All DBs
Position
1:complement(1708779..1710251)
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AA seq
441 aa
AA seq
DB search
MGGEGGPPGDNNKDKEDPDKKKKKRFEPRPRTTGARRRKRRQGPSGIQRIPTVLPASKCK
LRMMKLERIKDFLLMEQEFIRNHEVFKPREERDQEEREKLEELRGSPMGVGSLEELIDDN
HAIVSSSMGPEYYVNILSSVNQDLLEPGSAVLLHNKTMSVVGILEDDADPMVSVMKVEKA
PLESYADIGGLEDQIQEIKEAVELPLAHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAV
ANHTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPTIVFIDEIDAVGSKRYDSSS
GGTKEIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPFPDTK
TKRHIFNIHTSKMTLGEDVDLEKFIMSKDELSGADIKAICTEAGMLALRERRMRVVQEDF
VKAKEKALYRKKGNIPEGLYL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgaaggaggtcctcccggagacaacaacaaagacaaagaagaccccgacaaa
aagaaaaagaagcgctttgaaccccgcccgcgcaccaccggggcccgccgtcgcaaacgt
cgccaaggcccctcgggaatccaacgcatccccaccgtcctccccgcttctaaatgcaag
ctccgtatgatgaagttggaacgcatcaaggactttttattgatggagcaagagtttatt
aggaatcacgaggtgttcaaaccgagggaagagcgggatcaggaggagagagaaaagtta
gaggagttgcgtggtagtcccatgggtgtggggagtttggaggagctgattgacgataat
catgcgattgttagttcgtccatgggtccggagtattatgtcaacattttgagtagtgtg
aatcaggatttgttggagcccggttcggcggtgttgcttcataataagaccatgtcagtg
gtggggattttggaggatgatgctgatccgatggtgtcggtgatgaaggtggagaaggca
cctttggagagctatgcggatattggagggttggaggatcagattcaggagattaaggag
gcggtggagttgcctttggctcacccggagctttatgaggatattgggattaagcctcca
aagggtgtgattctgtatggcgaaccaggaacgggtaagacgttgcttgccaaagctgtg
gcgaatcatacctctgccacctttctgcgtgtggtgggttcagagcttattcaaaagtat
ctaggagatggaccaaagctcgtccgtgagctgtttcgagttgctgatgatttgagtcct
actattgtctttatcgacgagattgacgctgtgggatccaaacgttacgattctagttcg
ggaggtacaaaagaaatccaacgtaccatgcttgaattgctcaatcaacttgatgggttc
gacgaacgtggtgatgtcaaggtcatcatggcaacgaacaaaattgaatcgctcgatcca
gccttgatcagacccggacgtatcgatcgtaagattgagttcccctttcctgataccaag
actaaacgtcacattttcaacattcacacgtcaaagatgactttgggagaggatgttgat
ctggagaagtttattatgagcaaagatgagttgagcggtgctgatatcaaggctatttgt
accgaggctggcatgttggctttgagggaaaggaggatgagggttgtgcaggaggacttt
gtcaaggcgaaggagaaggctttgtatcgtaagaagggcaatatccccgagggattgtac
ctctaa
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