Thalassiosira pseudonana: THAPSDRAFT_39255
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Entry
THAPSDRAFT_39255 CDS
T01078
Name
(RefSeq) glycyl tRNA synthetase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
THAPSDRAFT_39255
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tps01007
]
THAPSDRAFT_39255
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tps03016
]
THAPSDRAFT_39255
03029 Mitochondrial biogenesis [BR:
tps03029
]
THAPSDRAFT_39255
Enzymes [BR:
tps01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
THAPSDRAFT_39255
Amino acid related enzymes [BR:
tps01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
THAPSDRAFT_39255
Transfer RNA biogenesis [BR:
tps03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
THAPSDRAFT_39255
Mitochondrial biogenesis [BR:
tps03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
THAPSDRAFT_39255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Cep57_CLD_2
Kbp-5
Motif
Other DBs
NCBI-GeneID:
7449079
NCBI-ProteinID:
XP_002287000
JGI:
39255
UniProt:
B8BS17
LinkDB
All DBs
Position
1:complement(2514167..2516524)
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AA seq
683 aa
AA seq
DB search
MSSADAPPAGSALQDEIDALNAKITLQGALVRTLKKESSSNADEIGIAVEELKKLKITAE
ELRKKQEAADPSKAFNRKSFDELILRKMFIVPSFEIHGGVKGLFDLGPPACALKAAMVDV
WRKHFVLAESMLEMECTCLTPEVVLKTSGHVDRFTDLMVKDPVSGECFRADKLLEDVIDE
LIEANPDMPTEEKEQHLRIQIQADAFSPAELDEQLTKYGCKAPSGEPYGPSFPFNLMFKT
SIGPEGTAVGYLRPETAQGLFVNFRRLLDANSQKMPFAAAQIGLGFRNEIAPRSGLLRVR
EFCMGEIEHFVNPDDKSHPNFSSVANKELVLFGRDDQLGSGKTKTIRVGDAVATGLVNNE
TLAYFMARTQLFMERIGMDPSRLRFRQHLTTEMAHYACDCWDLEIQSSYGWVECVGHADR
ACYDLDVHGKATKTPMIATMKLDEAREVEVAKLKFDRKALGKTFKGDQRVVAAALEALAE
NWADFEPVATTLESDGKATVDGFEITKEMVTWKKETKKVHEIKYTPSVIEPSFGMGRILY
SLLEHCFYQRDADEQRCVMRFKPAVAPHKCAVLPISSGDEVNAVVDEIAADLMDSDMATR
VDKSTASLGRRYSRADEVGVPFAVTVDFDTLADGTVTLRERDSTVQIRLPKSEVTKTVFD
FVHGRMTWDEATAKYPVVQVKED
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgccgacgcaccgccagcgggctctgccctacaagacgaaatagatgccctc
aacgcaaaaattaccctgcagggtgccctagttcgtactctcaagaaggagtcttcgtct
aatgccgatgaaatcggcattgccgtcgaggagctcaagaagctcaaaatcaccgcggag
gaattacggaagaagcaagaggcagccgacccaagcaaggccttcaaccgcaagtccttc
gatgagctcatcctccgtaaaatgttcatcgtgcccagttttgagatccacggcggtgtt
aaaggtctctttgacctcggtccacctgcttgtgcactcaaggcagctatggtggacgtt
tggaggaagcactttgttcttgcggaatccatgttggaaatggaatgcacctgtcttact
cccgaggttgtcttgaaaacgtctgggcatgtcgatcgtttcactgatctcatggtgaag
gatccagtgagtggagagtgcttccgtgcagataagttgttggaggacgtaattgatgag
ttgatcgaggccaatccagatatgcctacggaggaaaaggagcaacatttgcgtattcag
atccaagcagatgctttttctcccgctgagttggacgagcagcttaccaagtatggatgt
aaggcacccagtggtgaaccatacggtccttccttccctttcaacctcatgttcaagacg
agtattggaccggaaggaacggctgtgggatatttgagaccggagactgcacagggatta
tttgtcaactttagaaggttgttggacgctaattctcagaagatgccttttgcagctgct
cagattggacttggatttaggaacgaaattgctccccggtctggtcttcttcgtgtccgt
gaattctgcatgggagaaattgaacacttcgtcaaccccgacgacaaatctcacccgaac
ttctcctctgttgccaacaaggagttggttctttttggacgtgacgatcagcttggttcc
ggaaagacgaagaccattcgtgtcggtgacgcagttgctactggtcttgtgaacaatgaa
actcttgcctacttcatggctcgtactcaactcttcatggagcgtatcggtatggaccca
tctcgtttgcgtttccgtcagcacttgaccaccgaaatggcacattatgcttgtgactgt
tgggatcttgagattcaaagttcgtacggttgggtggaatgcgttggacatgctgatagg
gcttgctacgatttggatgttcacggaaaggcgacaaaaactcccatgattgctaccatg
aagttagatgaagcacgggaagtggaggtggcaaagttgaagtttgatcgtaaggcattg
ggcaagacgttcaagggagatcaacgtgtggtagctgctgccttggaggccttggctgag
aattgggcagactttgaacccgttgcaacaacacttgagtctgacggaaaggctacggtg
gatggattcgaaatcacaaaagaaatggttacgtggaagaaggaaacgaagaaggttcac
gagatcaagtataccccatctgtgattgagccatcgtttggcatgggaagaattttgtat
tctttgctcgaacattgcttctatcaaagagatgccgatgagcagagatgtgtcatgaga
ttcaagcctgctgttgccccacacaaatgtgcagtattgcccattagtagtggtgacgag
gtcaatgctgtggttgatgaaatcgcagcagatctaatggacagtgacatggcaactcgc
gtagacaagtctactgcatcgctcggaaggaggtattctagggcggacgaagttggtgta
ccttttgctgttacagttgactttgatactttggctgatggaaccgtgacccttcgtgaa
cgtgactctactgttcagatccgtttgcctaagtcggaggtgaccaagacggtgtttgac
tttgttcacggacgaatgacttgggacgaggcaactgccaagtatcctgttgttcaggta
aaggaggattaa
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