Thalassiosira pseudonana: THAPSDRAFT_3926
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Entry
THAPSDRAFT_3926 CDS
T01078
Name
(RefSeq) predicted protein
KO
K20293
conserved oligomeric Golgi complex subunit 6
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_3926
Membrane trafficking [BR:
tps04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
THAPSDRAFT_3926
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COG6_C
NQRA_2nd
Motif
Other DBs
NCBI-GeneID:
7443791
NCBI-ProteinID:
XP_002288572
JGI:
3926
UniProt:
B8BWC7
LinkDB
All DBs
Position
3:<2155263..>2157890
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AA seq
875 aa
AA seq
DB search
MSSTAATTSTVAGNNVLSDKVNRALNVRTDTPAMRAALDALASLPSLNDDTSASTDASAT
TTTAADGALIDARSVRAAIEQDALRRALQFQGELQKLANDATVLRQRVENVAKVADMVGR
CVESPIVVHSKEGMVLVGDDDDDSAAERTDVSNTNAWEEERILASHLHLAHKSYVEATQR
QIAVDAFLDKFDLGEGEARLLDHYNFEGFLVINNEHDTTTGEGENSNPWSHPNAALNVIG
QPSQRAVDDAMAFLSALERLAVIRKELSKTFGSGTSSTAKDELYEYDVSENDLDDDEGVI
SSGRKQQKQLGTNSALRMMEQLASRQERAHERLYQFVQYYLGIGSAAPSSNMRAVPTSST
DRPSMGVDPSIYNKGALGRFHDGDEMDEAYAHTVIRRSLHVLRNSPAHHVHALELIASSR
RTEVTRRFLLALTSGYGGMAPLEMRAHDPVGYVGDMLAFAFRAFRVEGELVKTLFIWKDE
IEVEKDGDEGTSKVDTQPNTEDEEGDQEGDRPMGVAEMLSQSMGGLSRPLGTRVKQVVTS
LSSQGIDGQEGIVQDDIMATQGGNDDDVTSSSLNRLVALYSVCGLLKFYCSAVHKALEKL
QQNQPEDVGVTDVTKNPFFATCDESLTEAADSYVASLRAYGAMLNSHATPMETEAQLAHR
AIVQIAEERVASPGFAEDSPLEISKEDVSSKQLSLSFLISTLVDAALPYLRSLDDSASLY
SALNSAVKCGLEGSESAKWSELIQERNASLMETLVDDETVKVLDVCGLGGIHTALQQMNG
ASIEGMAMSCHPGLSQSEVEAAMKQFYSSLFSPPIPTFEEIKDPELRKFARSKTALRVVD
VYRELYDAMTSEKGGYADFAFLGHEPDQVKTLLSL
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaccgcagccaccacaagcaccgtcgccggcaacaatgtcctctccgacaag
gtcaaccgagccctcaacgtccgcaccgacacacccgccatgagagccgctctcgatgca
ctcgccagcctcccctccctcaacgacgatacatcagcctccaccgacgcatccgctacg
actactactgctgctgatggagccctaatcgatgcccgatctgtacgcgcggcaatcgaa
caagatgcactacgaagagcgctgcaatttcaaggagagttgcagaagctggcgaatgac
gcaacggtgttacgacagcgtgtggagaatgtggcaaaggtggcggatatggtggggagg
tgtgtggagagcccgatcgttgtacattccaaggagggcatggtgttggtgggagatgat
gatgatgacagtgctgctgagaggacggatgtgagcaatactaatgcatgggaggaagaa
cgtatcttggcctctcatcttcatctggcacacaaatcgtatgtggaggcaacgcaacgt
cagattgccgtagatgccttccttgacaagtttgatttaggcgagggagaagcacgtcta
ttggatcattacaactttgaaggcttccttgtgatcaacaatgaacatgatactactact
ggagagggagagaattccaatccgtggagtcatccgaatgcagcgttgaatgtgattggt
caaccttctcagagggctgtggatgatgcaatggcctttttgagtgctttagaacggttg
gcggtgattcggaaggagttaagtaagacgtttggcagtggcacttcatccactgcaaag
gatgaattatacgagtatgatgtcagtgaaaatgacctggacgacgatgagggagtcata
tcatcaggaaggaagcaacaaaaacagctcggcaccaattctgcattacgaatgatggaa
caacttgcttctcgtcaagaacgtgcccacgaacgactatatcaatttgttcagtattac
ttgggaattggatctgcagctccttcttctaacatgagagctgtccccacctcttcgacg
gatcgaccttccatgggtgtggatccatccatatacaataagggagctttgggaaggttt
catgatggagatgagatggacgaagcatatgctcataccgtcattcgacgttcgttacat
gtgttaaggaattcaccggctcatcatgttcatgcgttggagttaattgcctctagtcga
aggactgaagtaacgaggaggttcctgttggcattgacgagtggatatggtggcatggca
ccgttggaaatgagagctcatgatcctgtggggtatgtgggagatatgttggcgtttgct
ttcagggcatttcgtgtggagggggagctggtcaagactttgttcatttggaaggatgaa
atcgaggtggagaaagacggagacgaaggaacatccaaggtggatacacaacctaataca
gaggacgaggagggagatcaagagggcgacagacccatgggtgttgctgaaatgctatca
cagagcatgggaggtctttcacgtccattgggaacgcgcgtgaaacaagtggtgacatca
ttgtcttctcaaggaatcgatggacaagagggtattgtccaagatgatatcatggcaacg
caaggaggaaatgatgacgacgtcacttcctcttcgctcaaccgtcttgtggcgttgtac
tcggtatgtggtcttctcaaattttattgctctgctgtgcataaggcattggaaaagtta
cagcagaaccagcccgaggatgttggagttacggacgtcacaaagaatccattctttgct
acatgtgatgaaagtctcactgaagcagcagactcgtacgttgcttcacttcgtgcttat
ggtgcaatgctcaattcacatgcaactcccatggagacggaggcacagcttgctcatcgt
gcgattgtacaaattgccgaagagagagtggcttctcctgggttcgcagaggattcaccg
ttggaaatctcaaaagaagacgtgtcgtcaaagcaactatctctctcattcctcattagc
acattggttgatgcagctctcccatatcttcgatccttggacgacagcgcctctctttat
tcagcacttaattcagctgtaaagtgtggattggaagggagcgagtctgccaaatggagc
gagctcatccaagagaggaatgcgtcactgatggagactcttgttgacgatgaaacggtc
aaggtgcttgacgtctgtggtcttggtggaatccacactgcactgcagcaaatgaatggt
gcctccattgagggtatggcgatgtcctgtcatcctggattgtcccaaagtgaggtagaa
gcagcaatgaaacagttctactcgtcactcttctcaccacccattccaacttttgaagag
atcaaagatccagagttgaggaaatttgccagatccaagacagcgttgagggttgtggat
gtatatcgggagttgtatgatgcaatgaccagtgagaaggggggctatgctgattttgcg
ttcctcgggcacgagcctgaccaagtgaagacattactttcactatga
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