Thalassiosira pseudonana: THAPSDRAFT_39497
Help
Entry
THAPSDRAFT_39497 CDS
T01078
Name
(RefSeq) arf-type small G protein
KO
K07953
GTP-binding protein SAR1 [EC:3.6.5.-]
Organism
tps
Thalassiosira pseudonana
Pathway
tps04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
THAPSDRAFT_39497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_39497
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
tps04031
]
THAPSDRAFT_39497
Membrane trafficking [BR:
tps04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
THAPSDRAFT_39497
GTP-binding proteins [BR:
tps04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Sar
THAPSDRAFT_39497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
G-alpha
Ras
Roc
SRPRB
MMR_HSR1
GTP_EFTU
Gtr1_RagA
Antibiotic_NAT
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
7446546
NCBI-ProteinID:
XP_002287808
JGI:
39497
UniProt:
B8BUA4
LinkDB
All DBs
Position
2:complement(931688..932456)
Genome browser
AA seq
192 aa
AA seq
DB search
MFLVNWFYDTLASLGLYHKNAKILFLGLDNAGKTTLLHMLKENRVQAHVPTLHPNTDELI
VGQLKLKTFDLGGHETARRLWQDYFTTVDGVVYLVDAIDRGRFPEAKRELDALLTSDELV
DVPFLVLGNKIDMPSAASEEELKYALGLLDTYGKDTKPDKNSGVRPIEVFMCSVVRRMGY
KDGFQWLSQFLS
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgtcaactggttctacgacaccctcgcctctctcgggctctaccacaaaaat
gccaaaatccttttcctcggcctcgacaacgccggcaaaaccaccctcctccacatgctc
aaagaaaaccgcgtccaagcccacgtccccaccctccatcccaacaccgacgagctcatt
gttggtcaattgaagctcaagacgtttgatttgggagggcacgaaacggcacgtaggcta
tggcaagactatttcacgacggtggatggagtggtgtatttggtcgatgctatcgaccga
gggagatttcccgaggcgaagagggagttggatgcgttgttgacttcggatgagttggtg
gatgttccgtttctggttttggggaataagattgatatgccctcggcggcgtcggaggag
gaattgaagtatgcgttgggtttgttggatacgtatgggaaggataccaagccggataag
aactcgggagtgaggccgattgaagtgttcatgtgttcagttgtgaggaggatggggtat
aaggatggatttcaatggttgtcgcaatttctttcttag
DBGET
integrated database retrieval system
