Thalassiosira pseudonana: THAPSDRAFT_39740
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Entry
THAPSDRAFT_39740 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03262
translation initiation factor 5
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tps03012
]
THAPSDRAFT_39740
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
eIF-5
THAPSDRAFT_39740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-5_eIF-2B
W2
TFIIF_alpha
Zn_ribbon_IS1595
Zip
Dsh_C
CIS_TMP
Presenilin
Motif
Other DBs
NCBI-GeneID:
7450487
NCBI-ProteinID:
XP_002288103
JGI:
39740
UniProt:
B8BW00
LinkDB
All DBs
Position
2:complement(2522003..2523812)
Genome browser
AA seq
404 aa
AA seq
DB search
MGRPGQIVNISGTTPVDDPEYRYKMPTVYGKIEGKGNGIKTVIPNISDVGLSLHRDAGEV
NKFFGCELGAQTTYNTETDRAVVNGAHTDQVLQQMVHKYIELFVLCPNCRLPETEYKIKS
GMIYHKCAACGNKDAVDMTHKLCTYILAQDKKAKQDAKKSGKKDKDKKEKKKKSKEDGSG
SDSDEKKKKEKKEKKSKDKKKEKKSKDKKSKSKDEDDEKDDYDSYDDDDNGGTEEHVDDA
NAMALAVEAMKKFLADNPDASPSAIAEKVVNEQMASGLKSQDKIHIFVQSVFTPDFYKQK
QVEKHAPAIAKITQGKNVMERHLIASFEGLCVDEPKKFAVVLKQLFDEEVLEEDTILEWA
GEGRTDYTLESVDEDQRAALRGEAEPVVVWLQEDDSSDEGSDSD
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgccccggacaaatcgtcaacatctcaggaaccacccccgtagatgatcccgaa
tatcgctacaaaatgccaaccgtctacgggaaaatcgaaggcaagggaaatggcatcaaa
accgtcattcccaacatctccgacgtgggcctctctctccaccgtgatgccggagaggtg
aacaaattcttcggatgcgaattgggcgctcagacgacgtacaataccgagacggatcgt
gcggtggtgaacggagcgcacacggatcaggtgttgcagcaaatggtgcataagtacatt
gagctgtttgtgctttgtccgaattgtaggttgcctgagacggagtataagatcaagagt
gggatgatttaccacaagtgtgcggcgtgtgggaataaggatgcggtggatatgactcac
aagttgtgcacttacatcttggcccaggataagaaagccaagcaggacgcaaagaagagt
ggcaagaaggataaagacaaaaaggagaagaagaagaaatccaaagaggatggaagtggc
tcggactctgatgaaaaaaagaagaaggaaaagaaggagaagaagtccaaggacaagaag
aaggagaagaagtccaaggataagaaatccaagtccaaggatgaagatgacgagaaggat
gactacgacagctatgacgatgatgacaacggtggtactgaagagcacgtggatgatgcc
aacgccatggccctcgccgttgaagccatgaagaagttcctcgccgacaacccggatgct
tctccctccgccattgccgaaaaggtcgtcaacgagcaaatggcgtctgggctcaagtct
caggataagatccacatctttgtgcaatccgtcttcactcccgacttttacaagcagaag
caggttgagaagcatgctcccgccattgccaagatcacccagggcaagaacgttatggag
cgtcatctcatcgcttcgtttgaaggtctttgcgtcgatgagcctaagaagttcgctgtt
gttctcaagcaactctttgatgaggaggtgttggaagaggacacgattcttgagtgggct
ggagagggacgtaccgactacactcttgagagcgtcgatgaggatcagagggctgccttg
aggggagaagctgagcctgtcgtggtttggttgcaggaggatgacagctcggatgagggg
tctgattctgattag
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