Thalassiosira pseudonana: THAPSDRAFT_39799
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Entry
THAPSDRAFT_39799 CDS
T01078
Symbol
GDCP
Name
(RefSeq) glycine decarboxylase p-protein
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00260
Glycine, serine and threonine metabolism
tps00630
Glyoxylate and dicarboxylate metabolism
tps00670
One carbon pool by folate
tps00785
Lipoic acid metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01200
Carbon metabolism
Module
tps_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
THAPSDRAFT_39799 (GDCP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
THAPSDRAFT_39799 (GDCP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
THAPSDRAFT_39799 (GDCP)
00670 One carbon pool by folate
THAPSDRAFT_39799 (GDCP)
Enzymes [BR:
tps01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
THAPSDRAFT_39799 (GDCP)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_1_2
SepSecS
Motif
Other DBs
NCBI-GeneID:
7444012
NCBI-ProteinID:
XP_002288699
JGI:
39799
UniProt:
B8BX31
LinkDB
All DBs
Position
3:complement(354806..358132)
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AA seq
973 aa
AA seq
DB search
MADTFSRRHVGPSDEDSKLMLQSIGFNDFESLIKSTVPANILSSTPLNLQPPLTESEALS
KIESMANKNKIMKSYIGMGYYDTIVPNVILRNMLENPGWYTSYTPYQAEIAQGRLEMLLN
FQTLCSDLTGLPMSVSSLLDESTAAAEAMQMCFSLKGKKGKKNKFFVSKDVHPQTISLIQ
TRAVVIGIDVIVGDHSASEVDSGEYCGAIVQYPNTYGSVESPGESYADFTKRAHDGGAMV
ICATDLMALTKLAPPSSWGADIAVGSAQRFGVPMGFGGPHAGFLSTSDQYSRKMPARIIG
VTIDSEGKPCLRMAMQTREQHIRRDKATSNICTAQALLANMAASYAIYHGPEGLKNISGR
IHALARVAHRELSNAGYGVTDSPFFDTFSVDVSKKGMTAAQVQEGAASVGANVRIIDENT
VGLSMGEGITRDDLSALLSGAFGIASPDVSADVSLTEVDATVARDTEILTHPIFHQHHSE
TQMLRYLKTLENRDLALNHSMISLGSCTMKLNATSEMIPVTWPGFCNIHPFAPHDQVQGY
HELIEDLNKDLAEITGFAAVSAQPNSGATGEYAGLLAIKSYLEHIGEGHRDVCLIPKSAH
GTNPASAAMAGMKVVVVDNDDEGNVDLDDLTKKIEKHRSNIAAFMVTYPSTFGVFEEKIV
EIIDMVHDAGGQVYMDGANMNAQVGLTSPGLIGADVCHLNLHKTFCIPHGGGGPGVGSIG
VAKHLAPFLPGHSVDPEASGKLCGSDLCVPKAGGAVAGAPFGSAAILPISWMYIKMNGYE
GLKKSTEVAILNANYMAARLNGAYDVLFAGKNGQCAHEFILDLRPLKAVTGITEEDVAKR
LQDYGFHSPTMSWPVAGTLMVEPTESEDLAELDRFCDAMLSIRAEIDDVGSGRIALEDSP
LRNAPHTMDNIINDKWDRKYSRDVGAYPAPWVRANKFWPTCGRVDNVHGDRNLVCTCPPI
SAYEEEDDIKEVA
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacgttctcacgacgtcatgtcggcccaagcgacgaagacagcaaacttatg
ctccaatccatcggcttcaacgactttgaatccctcatcaaatccaccgttccagcgaat
attctttcctccacaccactcaacctccaaccacccctcactgaatctgaggcactgtcc
aaaattgaatccatggcgaacaagaataagattatgaaatcatacattggaatggggtat
tatgatacaattgtccctaacgttattctgagaaatatgctggaaaatccaggatggtat
acttcgtacactccgtatcaagccgagattgcccaaggtcgtttggagatgttgttgaac
tttcaaacgttgtgctcggatttaactggactgcccatgtcggtgtccagtctgttggat
gagagtactgccgctgcagaggctatgcaaatgtgcttcagtctcaaggggaagaagggg
aagaagaacaagttctttgtatcaaaggatgttcatccacagacgattagtttgattcag
actcgtgctgttgtgattggaatcgatgtgattgttggagatcactctgcgtctgaagtg
gactcgggtgaatactgcggagctattgttcaataccccaacacatatggctcagtggaa
tcgcctggggaatcgtatgctgactttacgaagcgtgctcatgatggaggtgcaatggtc
atctgtgctactgatcttatggcgttgacgaaactcgctccaccctcgtcttggggagct
gacattgccgtgggctcagctcaacgatttggagtgccaatgggatttggaggacctcat
gctggtttcttgtctacctcagatcagtactctcgcaagatgcctgccaggattatcggt
gttacgattgactcggagggaaagccgtgcttgaggatggctatgcaaacacgagaacag
cacattcgtcgtgataaggcaacttccaatatttgcactgctcaagcattgcttgccaac
atggcggcatcttacgcaatctaccatggacctgagggattgaagaatatttcgggacgt
atccacgctttggctcgtgtggctcatcgtgaactgagcaatgctgggtatggtgtgacg
gatagtccattctttgataccttctcggtggatgtgtcgaagaagggaatgactgctgct
caggtgcaggagggagctgcatctgttggtgccaacgttcgtatcattgatgagaatact
gttggtttatcaatgggagagggcatcactcgtgatgatttatctgctcttctttcgggt
gcattcggtattgccagcccagacgtttcggcggacgtgtcgctcactgaggtcgacgca
actgttgcaagggacactgagatcttgacccatccaatctttcaccagcatcactccgag
acgcaaatgctccgttacttgaaaacactcgagaatcgtgatttggcgctcaaccattcc
atgatctccctcggatcgtgtacgatgaaactgaatgctaccagtgaaatgatccccgtc
acgtggcctggattctgcaacattcatccttttgctccacacgatcaggtgcaaggatac
cacgaactcattgaagatttgaacaaggacctcgcagagattactggatttgctgcagtg
tctgctcaacctaacagtggtgctactggtgaatacgctggacttctcgcaatcaagagc
tatcttgagcacattggcgaagggcatcgtgatgtctgtctcatcccaaagagtgcacat
ggtactaaccctgcgagtgctgcgatggctggtatgaaggtcgtggtggtagacaatgac
gatgaagggaatgttgacttggatgacttgacgaagaagattgagaagcaccgcagcaac
atcgctgccttcatggtgacttatccgtctacgttcggtgtatttgaggagaagattgtt
gaaattattgatatggtacacgacgctggagggcaagtgtacatggacggagccaacatg
aatgctcaagtgggtttgacgagtcctggactcatcggtgccgacgtctgtcatctcaac
ttgcacaagacgttctgtattcctcacggtggtggaggacccggcgttggttccattggc
gttgcaaaacacttggctcctttcctccctggtcattctgtggatcctgaagcgtccggt
aagctttgtggaagtgatctctgcgttcccaaagcaggtggagctgtcgcgggtgctcct
tttgggagtgctgcaatcctccccatttcttggatgtacattaagatgaacggatacgaa
ggcctcaaaaagtcaacagaagtggcgattttgaacgcaaactacatggccgctcgtctt
aacggagcctacgacgttctctttgctggaaaaaatggacagtgtgctcatgagtttatc
ctcgatcttcggccattgaaggctgtcactggaatcactgaggaggatgttgccaagcgt
cttcaagactatggtttccattcacctaccatgtcgtggccggttgcaggtactctcatg
gtggaaccgactgaatctgaggaccttgctgagcttgacagattctgcgatgccatgctt
tccattcgtgctgagattgatgatgtaggaagcggccgtatcgcattggaagattcgcca
cttcgcaatgcaccacacactatggacaatattatcaatgacaaatgggatcgaaagtac
tctcgtgatgtgggagcctacccagcaccttgggttagagcaaacaaattctggcctact
tgtgggcgtgttgacaatgttcatggagatcgtaacttggtgtgcacttgcccaccaatc
tcggcttacgaagaggaagatgatatcaaggaagttgcctag
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