Thalassiosira pseudonana: THAPSDRAFT_40001
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Entry
THAPSDRAFT_40001 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03596
GTP-binding protein LepA
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
LepA_C
EFG_C
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
Ras
EFG_III
RF3_C
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-GeneID:
7451309
NCBI-ProteinID:
XP_002288452
JGI:
40001
UniProt:
B8BYH3
LinkDB
All DBs
Position
3:1551890..1554397
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AA seq
706 aa
AA seq
DB search
MKFIHLAMTLAYSLPHIVDAFSTLSHQRIRTSNVGVSSIFTNSQRITTFSATPTTRRTTS
LFSTTENKKSSELVSNQDLGLGTSGFSTSRIRNFSIIAHIDHGKSTLADRLLESTQTVAA
RDMAAQLLDNMDLERERGITIKLQAARVLYKSEVDGEMYILNLIDTPGHVDFSYEVSRSL
AACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPAADPDRVAEEIEETIG
IDCSDAVRASAKSGIGINDILESIVKNVPPPQPDTGGPFRALIFDSLFDPYRGVIVFFRV
VDGAVKKGQKVRFLASKAEHDVTEVGIMQPNQVQVDCLRAGEVGYLCGSIKDVLDARVGD
TITLSSEYKAAAAKLDPKSEEDPITPLPGYSESIPMVYCGIFPVDADQYENLRDALGKLR
LNDAAISYEPETSGAMGFGFRCGFLGLLHMDVIRERLEREFDLDLIVTAPSVVYRVEKGE
GDSKTVEIVDAPSKMPEILREMKVMEPYVRMEILTPSEYNGQIIELGQERRGILKDINYL
TPTRSTIVYEVPLAEVITDFFDQLKSRTQGYASMEYQLIEYREGDLVRLDVKINYEDAPP
LATIVHVDAAQTVGRRLVASLKELIPRQMFKVPIQACIGVKVIASASISPMRKDVLAKCY
GGDLSRKKKLLQKQAKGKKRMKAMGKVNVPQEAFMAVIKLNKSAGD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcatccatttggcaatgacacttgcctactctctaccgcacatcgttgatgcc
ttctctactctatcacatcaaagaatacgcacatccaatgtcggtgtttcttccatattc
acaaactcccaaagaataacaaccttctcagcgacacctacgacacgacgaacaacctct
ctcttctctaccacagagaacaagaagtcatccgaactagtatccaaccaagatttaggc
ctcggtacctccggcttctccacctctcgcatccgcaacttctccatcattgctcacatt
gaccacggcaaatccactcttgccgatcgtctccttgaatcaacacaaacagttgcagcg
cgagatatggcagcgcagctacttgacaatatggacttggaacgcgagaggggtattact
ataaagttgcaggctgcgagggtgttgtataagagtgaggtagatggtgagatgtacatc
ttgaacttgattgatactccgggtcatgtggattttagttatgaagttagtagaagtttg
gctgcctgtgaaggagctttgttggtagtagatgctagtcaaggtgtggaagctcagaca
cttgccaatgtctacttggccttggaaaacaatcttgaaatcattcctgtattgaacaaa
atcgatctgccagcggctgatccagatcgtgttgcggaagagattgaagagacgattggt
atcgattgttctgatgcggtacgagcctctgccaaatctgggataggaatcaatgacatt
cttgaatccatcgtcaaaaatgtgccccccccacaacctgacactggagggccattccgt
gcactcatctttgactcgctatttgatccttaccgaggagtgattgtcttcttccgtgta
gtcgatggcgctgtaaaaaaaggacaaaaagttagattcttggcatccaaagctgaacac
gatgtgactgaagtgggaatcatgcaaccaaatcaggttcaagtcgactgtctacgtgcg
ggtgaggtaggatacctgtgcggctctattaaggatgtgttggatgctcgtgtgggagat
actatcacactgtcaagtgaatacaaagcggctgcggcaaagttggacccaaagagcgaa
gaggaccccattactcctttgccagggtacagtgaatcgatacctatggtttattgtgga
atattccccgttgatgctgatcaatacgagaacttgcgtgatgcccttggaaagttacgt
ttgaacgatgctgcaatctcatatgagccagaaacgtcaggagccatgggattcgggttc
cgttgtggatttttgggacttcttcatatggacgtcatcagggaaaggcttgagcgagag
tttgaccttgatttgattgtcacggctccatcggtggtgtaccgtgtggagaagggagaa
ggagatagcaaaactgtagaaattgtggacgcaccctcaaagatgccagagattctacgt
gaaatgaaagtcatggaaccgtacgtgaggatggagattctgacgccaagcgaatacaac
ggacaaatcattgaactaggtcaggagcgtcgtggaatcctaaaggatatcaactatctc
acaccaacaagatccaccatcgtgtacgaagttcctttggccgaggttatcaccgacttc
ttcgatcagctcaagagtcggacgcaaggatatgcatccatggagtatcaacttattgaa
tatcgcgaaggggatcttgttcgtctagatgtgaaaatcaactacgaagatgctcctcca
ttggctacaattgtgcacgtggatgctgctcaaacagtcgggcgccgtctcgtagccagt
ttgaaagagttgattcctcgtcaaatgttcaaagtaccaatccaagcatgtattggagtg
aaagttattgccagtgcttcgatatcgcccatgaggaaggacgtgttggccaagtgttat
ggtggagatttgtcacgtaaaaagaagctgttgcaaaagcaggccaagggcaagaaacga
atgaaggcaatgggaaaagtcaacgtgcctcaggaagcattcatggctgtgattaagttg
aacaagagtgctggtgattag
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