KEGG   Thalassiosira pseudonana: THAPSDRAFT_40089
Entry
THAPSDRAFT_40089  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K07179  RIO kinase 2 [EC:2.7.11.1]
Organism
tps  Thalassiosira pseudonana
Pathway
tps03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    THAPSDRAFT_40089
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:tps01001]
    THAPSDRAFT_40089
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tps03009]
    THAPSDRAFT_40089
Enzymes [BR:tps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     THAPSDRAFT_40089
Protein kinases [BR:tps01001]
 Serine/threonine kinases: Other
  RIO family [OT]
   THAPSDRAFT_40089
Ribosome biogenesis [BR:tps03009]
 Eukaryotic type
  Pre-40S particles
   Kinases
    THAPSDRAFT_40089
SSDB
Motif
Pfam: RIO1 Rio2_N APH Kdo ABC1 Pkinase TCAD9 Citrate_synth_N OspG_kinase
Other DBs
NCBI-GeneID: 7443787
NCBI-ProteinID: XP_002289056
JGI: 40089
UniProt: B8BWB8
LinkDB
Position
3:complement(2122123..2123408)
AA seq 293 aa
MKLDPTVMRTMGKQDFRVLAAVESGMKNHSLVPIALVNSIANLRHGGTNKILSSLLRDKL
LSHDQSCGYDGYRLTNCGYDILALWGLKSRGIIAGLGDKIGTGKESDVYVAITPQNTQIV
LKFHRLGRTSFRDVKKKRDYFMVNALSKNKKQGTQYRTLPNSWLFLSRTSALKEFAFMKS
LYEVGYPTPRPVGQNRHIVAMGLVRGVPLYQLHANRVSAEQAESIFRQSALLAGRLAQHG
LVHCDLNEFNLMVDLSGPIVTLIDFPQMVSTRHPNAQELYERDVECLKVFFGK
NT seq 879 nt   +upstreamnt  +downstreamnt
atgaagctagatccaaccgtaatgcgtacaatgggcaaacaggactttcgcgtcctcgcc
gcagttgaaagtggaatgaaaaatcactccctcgtacccatagccctcgtcaactccatt
gccaacctacgacacggaggtaccaacaaaatattgtcgagtttgttgagagataagctg
ttgagtcatgatcagagttgtggatatgatggatataggttgacgaattgtggatatgat
atattggccttatgggggttgaaaagtagggggatcattgccgggctgggcgataagatt
ggtactggaaaagagagtgacgtttatgtcgccataacgcctcaaaacacacaaatcgta
ctcaaattccatcgtctcggccgtacttcctttcgtgacgtcaagaagaagcgagactac
ttcatggtgaatgctctgtcaaagaacaaaaagcaaggtactcaataccgcacgcttcca
aacagctggctgtttctatctcgtacctcggcgttgaaggagtttgcattcatgaaatca
ttgtatgaagttggatatcctacaccaaggccagttggccagaacaggcacatcgttgcc
atgggactagtgagaggtgtgccgttgtatcagctgcatgcaaatagagtgagtgcagaa
caggcagagtccatctttcgtcagagtgccttgttggcaggaaggttagcacaacatggg
ttggtacattgcgatttgaatgagtttaacttgatggtggatttgagtggccccatcgtt
acgttgatcgactttcctcaaatggtatcgacgaggcatccaaatgcgcaggaactgtat
gaacgagatgtcgaatgcttaaaggtattctttggaaag

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