Thalassiosira pseudonana: THAPSDRAFT_40232
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Entry
THAPSDRAFT_40232 CDS
T01078
Symbol
OAM1
Name
(RefSeq) mannosyl-oligosaccharide 1,2-alpha-mannosidase
KO
K01230
mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:
3.2.1.113
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00510
N-Glycan biosynthesis
tps00513
Various types of N-glycan biosynthesis
tps01100
Metabolic pathways
tps04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
THAPSDRAFT_40232 (OAM1)
00513 Various types of N-glycan biosynthesis
THAPSDRAFT_40232 (OAM1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
THAPSDRAFT_40232 (OAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_40232 (OAM1)
Enzymes [BR:
tps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.113 mannosyl-oligosaccharide 1,2-alpha-mannosidase
THAPSDRAFT_40232 (OAM1)
Membrane trafficking [BR:
tps04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
THAPSDRAFT_40232 (OAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_47
DUF7258
Motif
Other DBs
NCBI-GeneID:
7447469
NCBI-ProteinID:
XP_002289678
JGI:
40232
UniProt:
B8C1C1
LinkDB
All DBs
Position
4:complement(557555..559107)
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AA seq
445 aa
AA seq
DB search
MKHVWKNYKEYAFGKDELHPISHKSTNNWGGMGTSLVDSLDTLWLMDLKDEFYEARDWVR
ESLSHSHVGDVSAFETTIRSLGGLLSAYDLSRDAVFLEKAEDLGSRLFKSFNTPSGLPHG
SVNLQTGTSHNFGWNGNAYILAEIGTVQIEYRYLAHATGKTEYATKSERVFDILADIMPK
DGLLSQNLKDKGGSAYFSNDKVSFGAMGDSTYEYMIKMWLQGGRKEQKYRDMWDHSMSGV
HEQLLQKSSPNGLSYIADRVSGRIDHKMDHLVCFMGGALAIGAYTDPLGFDSPRAQRDLK
TAKALTYTCYQMYARSKTGIAPEFVRFAGGNDFEIPSSAPFYILRPETVEAFYYLSVLTG
DPIYREWGWEIFQSIEKYCRVQYGYGSLKHVDNVNMNPEDRMESFFMAETLKYFYLLFDP
DSEIDILNKHVFNTEAHPMKIFESQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacgtttggaagaactacaaggagtatgcttttggaaaagacgaattgcatccc
atttcgcacaaatctacgaacaactggggcgggatgggaacttcactcgtggattctctt
gacacattgtggttgatggatctcaaagatgaattctacgaagctagggattgggttcgt
gagagcttatcgcattcacatgtcggcgacgtgtcggcgtttgaaacaacaatccgtagt
ttaggggggctcctctcggcttatgatcttagccgcgacgcggtgttccttgaaaaggca
gaagaccttggatcgcgattgttcaaatcgttcaatactccttccggcttgcctcatgga
agcgtcaatctacagacgggaacatctcataactttggatggaatggcaatgcatacatt
cttgcagagattggtactgtccaaattgaatacagatacctcgcccatgcaacgggcaaa
actgaatacgcgacaaagtcagaacgagtctttgacatactagcagatatcatgccaaag
gatggtttgctatcacagaatctgaaagacaagggtggttccgcatacttcagcaatgat
aaagtcagtttcggtgcaatgggagattccacctacgagtacatgattaagatgtggcta
caaggtggacgcaaggaacaaaagtatagggacatgtgggatcattcaatgagcggagtg
catgagcaacttttgcaaaagagcagcccaaatggattatcgtacattgcagatagagta
tctggaaggattgaccacaagatggaccatttggtatgtttcatgggaggtgctctcgca
attggagcatacactgatccacttgggtttgattcacctcgtgcacaacgtgatttgaag
accgccaaagccttgacgtacacttgctaccaaatgtacgctaggtcaaagactgggatt
gcccctgaattcgtcaggttcgccggaggaaatgattttgagatcccttccagtgcaccc
ttttacattcttagacccgaaacagttgaagccttctactatctcagcgtcctgactgga
gatccaatctacagggagtgggggtgggaaatcttccagtcaatagaaaagtactgcaga
gtacaatacggctatggatcattgaaacacgttgacaatgtaaacatgaatcctgaagat
agaatggagtcgtttttcatggcagagacgctgaagtatttttatctgttgtttgatccg
gactcggagattgatatcttgaacaaacacgtcttcaatacagaagcacatcctatgaag
atctttgagagtcaatga
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