Thalassiosira pseudonana: THAPSDRAFT_40265
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Entry
THAPSDRAFT_40265 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14574
ribosome maturation protein SDO1
Organism
tps
Thalassiosira pseudonana
Pathway
tps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THAPSDRAFT_40265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_40265
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
THAPSDRAFT_40265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
RecX_HTH1
Motif
Other DBs
NCBI-GeneID:
7453336
NCBI-ProteinID:
XP_002289744
JGI:
40265
UniProt:
B8BZ37
LinkDB
All DBs
Position
4:complement(<864457..>865002)
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AA seq
182 aa
AA seq
DB search
MSRQITQPVNQVRLTNVAVVRLSRGGHRFEVACYRNKIVNYRQGTETDLSEVLQTTTVFT
NVSKGQFAKSSLLQECFGTSDEEEVCRFILEKGDVQISDQERAVQLESTIREVASMVSEK
CIHPISRRPYTMAQVRDAMKSAGFMVHPTRNIKQQFLDCVRLLQEKKVLNIERAKMQLAL
VL
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcaaattacccaaccagtcaatcaagttcgtctcacgaacgtggcagtcgtt
cgcctctcccgtggaggccaccgtttcgaagtagcatgctaccgcaacaagattgtaaac
taccggcagggtactgaaaccgatctatccgaggtcctgcagaccacaactgtattcaca
aatgtatccaagggtcaatttgccaagtcgtcgcttctccaagagtgctttggaacatca
gacgaagaggaggtgtgtcgtttcatcctagaaaagggagatgtacaaatcagtgatcaa
gaacgggctgtccagttagagtctacgatacgtgaagtggcgagtatggtgtctgaaaaa
tgtatacatcccatcagccgtcgaccgtacacaatggcacaagtgagagatgcaatgaag
agtgcagggttcatggtacatccaacgaggaacattaaacaacagttcttggactgcgtg
aggttgcttcaggagaagaaagtgttgaatattgagagggcaaagatgcagttggcgtta
gtactt
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