Thalassiosira pseudonana: THAPSDRAFT_40522
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Entry
THAPSDRAFT_40522 CDS
T01078
Symbol
VAT1
Name
(RefSeq) vacuolar ATPase
KO
K02147
V-type H+-transporting ATPase subunit B
Organism
tps
Thalassiosira pseudonana
Pathway
tps00190
Oxidative phosphorylation
tps01100
Metabolic pathways
tps04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
THAPSDRAFT_40522 (VAT1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
THAPSDRAFT_40522 (VAT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_40522 (VAT1)
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
THAPSDRAFT_40522 (VAT1)
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Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
ATP-synt_VA_C
ATP-synt_ab_N
DUF561
Motif
Other DBs
NCBI-GeneID:
7451394
NCBI-ProteinID:
XP_002289999
JGI:
40522
UniProt:
B8C0L1
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Position
4:complement(2194865..2196842)
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AA seq
506 aa
AA seq
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MASHADERFIPERKKLDQLSVVKDYSVVPRLEYRTIAGVNGPLVILDNVKLPKYAEIVNL
TLGDGTTRSGQVLEVSGSRAVVQVFEGTSDIDNRKTRCEFTGDVLKMGVSEEMLGRSFNG
SGKVIDNAPKVLPEAYLDINGQPINPSARDYPKAMIQTGISAIDVMNSVARGQKIPIFSA
AGLPHNEVAAQIARQASLVKLKDTTDSHEENFAIVFGAMGVNMETARFFRSDFEESGAMQ
RTALFLNLANDPTIERIITPRLALTTAEYLAYERDLHVLVILTDMSSYADALREVSAARE
EVPGRRGYPGYMYTDLSTIYERAGRVVGRNGSITQLPILTMPNDDITHPIPDLTGYITEG
QIYLDRQLHTKGIFPPINVLPSLSRLMKSAIGEGMTRDDHGSVSNQLYASYAMGKDVLAM
KAVVGEEALSMEDHLYLSFLERFESKFVSQGPYQARTIFESLDLAWSILRAFPKELLKKI
PKKTLDQYYARRATAKEDMNKADGSN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccacgcagacgaacgtttcatccccgagaggaaaaagttggatcagctgtcg
gttgtgaaagactattcggttgttcctcgtttggagtatcgtaccattgcaggagtaaac
ggacccctcgtcatcctcgacaatgtgaaactccccaaatacgccgaaatcgtcaacctc
accctcggcgacggaaccacccgctcaggccaagtcctcgaagtctccggttcccgtgcc
gtcgtccaagtcttcgagggaacctccgacattgacaaccgcaaaacccgatgtgagttc
accggcgacgttcttaaaatgggagtctcggaagagatgcttggtcgatcctttaacgga
tctggtaaagtgattgataatgctcccaaggtcctccccgaggcatacctcgacatcaac
ggtcagcccatcaacccctctgctcgtgactaccccaaggccatgatccaaactggtatc
tcggccattgacgttatgaactccgttgcacgtggacagaaaatccccatattttctgct
gccggtctcccccacaatgaagtcgctgcccaaatcgcccgtcaggccagtttggtcaag
ttgaaggacactaccgactctcacgaggagaactttgccattgttttcggtgccatggga
gtgaatatggagacggctcgtttctttaggagtgatttcgaggagagtggtgccatgcaa
cgtactgccttgtttttgaacttggcgaatgatccaacgattgaacgtattattactccc
cgtttggcgttgactactgcggagtacttggcttacgagagggatttgcacgtgttggtt
atcttgacggatatgagttcgtacgccgatgctttgcgtgaggtttcggctgctagggag
gaggttcctggacgtcgtggataccctggttatatgtataccgatttatccaccatttat
gagagagctggacgtgttgttggaaggaacgggtctattacacagttgcccatcttgacg
atgcctaacgacgatattacgcatcctattcctgacttgactggatacattacagaggga
caaatctacttggatcgtcaactccacaccaagggtatcttcccacccatcaacgtgctt
ccttctctgtctcgtctaatgaaatccgccattggtgagggtatgactcgtgatgatcat
ggatccgtttccaaccagctttatgcgtcctacgccatgggtaaggatgttctggccatg
aaggcagttgttggagaggaggccttatccatggaggatcacttgtacctctccttcctg
gaaaggtttgagtccaagtttgtttctcagggaccttaccaggcacgtactatctttgag
tctttggatttggcctggtctatcttgagggcattccccaaggagttgttgaagaaaatc
ccaaagaagactttggatcagtactacgcacgaagggcgactgccaaggaggacatgaac
aaggcagatggatcgaactaa
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