KEGG   Thalassiosira pseudonana: THAPSDRAFT_40529
Entry
THAPSDRAFT_40529  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K11143  dynein axonemal intermediate chain 2
Organism
tps  Thalassiosira pseudonana
Pathway
tps04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:tps00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    THAPSDRAFT_40529
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:tps03037]
    THAPSDRAFT_40529
   04812 Cytoskeleton proteins [BR:tps04812]
    THAPSDRAFT_40529
Cilium and associated proteins [BR:tps03037]
 Motile cilia and associated proteins
  Dynein arm
   THAPSDRAFT_40529
Cytoskeleton proteins [BR:tps04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     THAPSDRAFT_40529
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd WD40_WDHD1_1st MIOS_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_2nd
Other DBs
NCBI-GeneID: 7451401
NCBI-ProteinID: XP_002290008
JGI: 40529
UniProt: B8C0M7
LinkDB
Position
4:complement(2233758..2236699)
AA seq 581 aa
MEIAFSYTKQRKEFGKHCKFTDGPTEVLESILPTDAYDDNYIQRNPVVTAVDTTPHYSQT
EVNTERVVTKSTSMTHTEGGWPKDVDFTEQSDVKRFRKKVEKDEDYQFAMKTLVPKVERC
MKQNNTVNVYEEYFDNVETEIYSEPPYAMGLAVFRDPSQITRTATSVNWHPEGSSSGKLA
VSYSVLNFQDARLNNPQLSTSSYIWDVTNSNKPIVELTPPSPLCCLRYNPKSSDTLVGGS
YNGTISYYDLRKPNGPAGKCGPAETSVIEKSHHDPVSDVFWVSSKTGHQCASVSTDGQML
WWDTRKLEVPIDFLILDTDCKGGGMKLGGSSLEYSTEAGPTKFLVGTEQGIVMSVNLRNK
KTNNGITVFDTCAGKHNSPIPSIQRNPTHTKYFMTVGDWTARIWSEDLKTPIVTTRHHNS
YLTGGCWSPTRAGVFYVTRSDGVLDVWDISHNQNEVAYSQKVSDTALTCIGIEGNTQGGG
KLVALGDANGTVSLLEVCDSLARSQPNEKASVSAMFERETIREKNLEVREREVKRAKAQE
EDRRKREGNQSGGCSTGLLESLEEDYLNMLKVEETDENNGE
NT seq 1746 nt   +upstreamnt  +downstreamnt
atggaaatagcgtttagctacacaaagcagcgaaaggagttcggcaagcactgcaagttc
acagacggaccgactgaagtgttggagagtatccttcccaccgacgcatacgatgataac
tacattcaacgtaatcccgtagtcacggccgtcgacaccacacctcactactcacagaca
gaagtaaacaccgaacgtgttgtcacgaagagcacaagcatgacgcacacggaaggaggc
tggcctaaggacgtggatttcacagagcaaagcgacgtcaaacgctttcgcaaaaaggtt
gagaaggacgaagactatcaatttgcgatgaagactcttgtgcccaaggtggaacgctgc
atgaagcagaacaacactgtcaacgtctacgaagagtactttgacaacgtggagacggag
atctattccgagccaccttacgcaatgggtttggcggtctttcgcgatcctagccaaatc
actcgcactgccacaagtgtgaattggcatcctgaaggttcctcttctggcaagcttgct
gtttcgtattcagtgttgaacttccaggatgcacgtctaaacaatccacagttgtcaacg
tcgtcctacatttgggatgttacaaactccaacaagcccatcgtggagctaactccaccg
tctccgctgtgttgtttgaggtacaatcccaagagttcggacactcttgttgggggcagc
tacaacggaacaatatcttactacgatctacgcaagccaaacggaccggctggaaagtgt
ggacctgcagagacctccgtcattgaaaagtctcaccacgatcctgtctcggacgtcttt
tgggtatcctcaaagactggtcatcagtgtgcttctgtatcaaccgacgggcaaatgctt
tggtgggacactcgcaaactcgaggtgccaatcgattttctcatactcgacaccgactgc
aagggaggtggaatgaagctgggtggatccagcttggagtacagtacggaagcaggtcca
accaagttcttggttggtacagaacagggtatcgtaatgtctgtcaaccttcgcaacaag
aagacgaacaacggaatcactgtcttcgatacttgtgctggcaaacataacagtccgatc
ccttccattcaacgcaatcctacccataccaagtacttcatgaccgttggtgattggact
gctcgtatctggtcggaagatctcaaaactccaatcgttacaacgaggcatcacaatagc
tacttgacaggcggatgctggtctcctacacgagctggggtgttttacgttactcgttcg
gatggagtattggacgtttgggacataagccacaatcaaaatgaagttgcttacagccaa
aaagtgagcgatactgctctcacttgcattggcattgagggtaatactcaaggaggcggt
aaacttgtagcattgggagatgctaatggtactgtgagtttgttagaagtctgtgactcc
ttggctcggtctcagccgaacgaaaaggcatctgtcagtgcaatgtttgaacgcgagacc
atccgtgagaaaaatctagaggttcgtgaacgcgaagtcaagagagcgaaggctcaagaa
gaagaccgccgcaaacgagaaggaaatcaatcagggggttgctccaccggcctcctcgag
agcctcgaggaagactatctcaacatgttaaaggttgaggagactgatgagaacaacgga
gaataa

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