Thalassiosira pseudonana: THAPSDRAFT_40529
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Entry
THAPSDRAFT_40529 CDS
T01078
Name
(RefSeq) predicted protein
KO
K11143
dynein axonemal intermediate chain 2
Organism
tps
Thalassiosira pseudonana
Pathway
tps04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
THAPSDRAFT_40529
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tps03037
]
THAPSDRAFT_40529
04812 Cytoskeleton proteins [BR:
tps04812
]
THAPSDRAFT_40529
Cilium and associated proteins [BR:
tps03037
]
Motile cilia and associated proteins
Dynein arm
THAPSDRAFT_40529
Cytoskeleton proteins [BR:
tps04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
THAPSDRAFT_40529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
MIOS_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
7451401
NCBI-ProteinID:
XP_002290008
JGI:
40529
UniProt:
B8C0M7
LinkDB
All DBs
Position
4:complement(2233758..2236699)
Genome browser
AA seq
581 aa
AA seq
DB search
MEIAFSYTKQRKEFGKHCKFTDGPTEVLESILPTDAYDDNYIQRNPVVTAVDTTPHYSQT
EVNTERVVTKSTSMTHTEGGWPKDVDFTEQSDVKRFRKKVEKDEDYQFAMKTLVPKVERC
MKQNNTVNVYEEYFDNVETEIYSEPPYAMGLAVFRDPSQITRTATSVNWHPEGSSSGKLA
VSYSVLNFQDARLNNPQLSTSSYIWDVTNSNKPIVELTPPSPLCCLRYNPKSSDTLVGGS
YNGTISYYDLRKPNGPAGKCGPAETSVIEKSHHDPVSDVFWVSSKTGHQCASVSTDGQML
WWDTRKLEVPIDFLILDTDCKGGGMKLGGSSLEYSTEAGPTKFLVGTEQGIVMSVNLRNK
KTNNGITVFDTCAGKHNSPIPSIQRNPTHTKYFMTVGDWTARIWSEDLKTPIVTTRHHNS
YLTGGCWSPTRAGVFYVTRSDGVLDVWDISHNQNEVAYSQKVSDTALTCIGIEGNTQGGG
KLVALGDANGTVSLLEVCDSLARSQPNEKASVSAMFERETIREKNLEVREREVKRAKAQE
EDRRKREGNQSGGCSTGLLESLEEDYLNMLKVEETDENNGE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagcgtttagctacacaaagcagcgaaaggagttcggcaagcactgcaagttc
acagacggaccgactgaagtgttggagagtatccttcccaccgacgcatacgatgataac
tacattcaacgtaatcccgtagtcacggccgtcgacaccacacctcactactcacagaca
gaagtaaacaccgaacgtgttgtcacgaagagcacaagcatgacgcacacggaaggaggc
tggcctaaggacgtggatttcacagagcaaagcgacgtcaaacgctttcgcaaaaaggtt
gagaaggacgaagactatcaatttgcgatgaagactcttgtgcccaaggtggaacgctgc
atgaagcagaacaacactgtcaacgtctacgaagagtactttgacaacgtggagacggag
atctattccgagccaccttacgcaatgggtttggcggtctttcgcgatcctagccaaatc
actcgcactgccacaagtgtgaattggcatcctgaaggttcctcttctggcaagcttgct
gtttcgtattcagtgttgaacttccaggatgcacgtctaaacaatccacagttgtcaacg
tcgtcctacatttgggatgttacaaactccaacaagcccatcgtggagctaactccaccg
tctccgctgtgttgtttgaggtacaatcccaagagttcggacactcttgttgggggcagc
tacaacggaacaatatcttactacgatctacgcaagccaaacggaccggctggaaagtgt
ggacctgcagagacctccgtcattgaaaagtctcaccacgatcctgtctcggacgtcttt
tgggtatcctcaaagactggtcatcagtgtgcttctgtatcaaccgacgggcaaatgctt
tggtgggacactcgcaaactcgaggtgccaatcgattttctcatactcgacaccgactgc
aagggaggtggaatgaagctgggtggatccagcttggagtacagtacggaagcaggtcca
accaagttcttggttggtacagaacagggtatcgtaatgtctgtcaaccttcgcaacaag
aagacgaacaacggaatcactgtcttcgatacttgtgctggcaaacataacagtccgatc
ccttccattcaacgcaatcctacccataccaagtacttcatgaccgttggtgattggact
gctcgtatctggtcggaagatctcaaaactccaatcgttacaacgaggcatcacaatagc
tacttgacaggcggatgctggtctcctacacgagctggggtgttttacgttactcgttcg
gatggagtattggacgtttgggacataagccacaatcaaaatgaagttgcttacagccaa
aaagtgagcgatactgctctcacttgcattggcattgagggtaatactcaaggaggcggt
aaacttgtagcattgggagatgctaatggtactgtgagtttgttagaagtctgtgactcc
ttggctcggtctcagccgaacgaaaaggcatctgtcagtgcaatgtttgaacgcgagacc
atccgtgagaaaaatctagaggttcgtgaacgcgaagtcaagagagcgaaggctcaagaa
gaagaccgccgcaaacgagaaggaaatcaatcagggggttgctccaccggcctcctcgag
agcctcgaggaagactatctcaacatgttaaaggttgaggagactgatgagaacaacgga
gaataa
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