Thalassiosira pseudonana: THAPSDRAFT_40554
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Entry
THAPSDRAFT_40554 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
AAA_28
AAA_16
MMR_HSR1
AAA_33
AAA_24
AAA_18
RuvB_N
AAA_23
ORC-CDC6-like
AAA_14
AAA_30
AAA_15
RsgA_GTPase
cobW
Zeta_toxin
AAA_27
ATP-synt_ab
NACHT
AAA_25
Dynamin_N
Phage_GP20
Motif
Other DBs
NCBI-GeneID:
7446712
NCBI-ProteinID:
XP_002290029
JGI:
40554
UniProt:
B8C0S4
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Position
4:complement(2387130..2389419)
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AA seq
614 aa
AA seq
DB search
MESSQPDYSALRLENIAITFRDQPVLQSATWGVQTGDRIGLVGANGAGKTTQLRIMAGEL
EPTAGDVVKSKKDLRVAMLRQEFIDEIDLERTLRDEFMSVFTEEAEIMEQLREAEEQLGQ
MSGDAVDADAMQEVLDRMAKLQNKADDKNVNALDSRVSKIMDLMGFDPEEGDYTVGMFSG
GWKMRIGLGKVLLKDPNILLLDEPTNHLDLESVEWLEAFLRNQNIPMVIVSHDREFLDQV
CTKIVDAEGGICSEYNGNYSKFLQLKKARMDSWHASYNAQEKKIKEEKQWINKFRLKQPQ
AVKQREAQLEKLVKSSDYIQKPPFFGKPFRFRFPAAPRLSPEVAEVKGLTHGYGDGANRL
FEDTDLFIEKGDRIAIIGPNGAGKSTLLRILMGKEQPDEGSAEIVGSNVYPAYFEQNQAD
VLDLDKTVVETIQGASSGQSYNELRALLGQFLFKGDAVEKKVENLSGGEKARLSLCCMML
KESNLLILDEPTNHLDIPAKEMLEEALQHFDGSVVVISHDRYFISKVATTIVAIEDKKLI
KYGGDYKFYMDKSEYVKEKIEARYVSGLDRIGNAPVIDLEELQKPKKNFGGAKTANMVTR
KNKGVKNAKRKEEK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaatcctcccaaccagactactctgctctccgtctcgagaacattgccatcaccttc
cgcgatcagcccgtacttcaatcggccacatggggagtacaaaccggtgatcgtatcggg
ttggtgggtgccaatggtgctgggaagacgactcagttgaggattatggcgggggagttg
gaacccaccgcgggggatgtagttaagagtaagaaggatttgagggtggctatgctcagg
caagagtttattgatgagattgatttggaacgtacactgcgcgatgagtttatgagtgta
tttacggaagaagcagagattatggaacaattacgtgaagcggaagagcagcttggccaa
atgtcgggggatgcggtcgatgccgatgctatgcaggaggtgttggatagaatggccaag
ttgcagaataaggcggatgataagaatgtgaatgctttggattcaagggttagtaagatt
atggatttgatgggatttgatccagaggagggggattacactgtgggtatgttctcgggt
gggtggaagatgcgtattgggttgggaaaggtgttgctcaaggatccaaatattcttctg
cttgacgaaccaacaaaccacttggatcttgaaagtgtagagtggttagaagccttcttg
cgtaatcaaaacataccaatggtgatagtgagccacgaccgtgaattcttggatcaagtt
tgtaccaagattgtggatgccgagggaggaatctgcagcgagtataatggcaactattcc
aagttcttgcagttgaagaaggctcgtatggactcgtggcatgcatcgtacaatgctcag
gagaagaagattaaggaggagaaacaatggatcaacaaattcagactcaagcaaccacag
gcagttaagcaacgcgaggctcagttggagaagttggtcaagagttccgattatattcag
aagcctcccttctttggcaaacctttcagattccgtttcccggcagctcctcgtttgagt
ccagaagtggcagaagtgaagggattgactcatgggtatggagatggagccaatcgtctg
tttgaggacactgatttattcattgaaaagggcgacagaatcgcaatcatcggacccaac
ggagcaggcaagtctactttgctgcgaattctcatggggaaagagcaaccagacgaagga
tctgccgagattgtcggaagcaacgtctaccccgcctactttgaacaaaaccaagccgat
gtgttggacttggacaagacggttgttgaaactatccaaggtgcaagcagtggccaatcg
tacaatgaacttcgtgcactgctagggcaattcttgttcaagggcgatgctgtagagaag
aaggtggagaacttgagtggaggagagaaggctcgtttgtcgctatgttgcatgatgttg
aaggaatcaaatctgctcattcttgacgagccaaccaaccatcttgacatcccagcaaag
gaaatgctggaagaggctcttcaacactttgacggatcagtggttgtcatttctcacgat
cgatacttcatcagtaaagtcgccaccactattgtcgccattgaggataagaagttaata
aagtatggaggagattacaagttttacatggacaagagtgagtatgtcaaggagaagatc
gaggcacgatatgtttcaggattggataggattgggaatgctccggttatcgatctggag
gaactgcagaagccaaagaagaacttcggcggggcgaagactgctaacatggtaacacgg
aaaaataagggagtgaagaatgcaaagcgaaaagaagagaagtaa
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