KEGG   Thalassiosira pseudonana: THAPSDRAFT_40586
Entry
THAPSDRAFT_40586  CDS       T01078                                 
Symbol
GMD1
Name
(RefSeq) gdp-d-mannose 4,6-dehydratase
  KO
K01711  GDPmannose 4,6-dehydratase [EC:4.2.1.47]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00051  Fructose and mannose metabolism
tps00541  Biosynthesis of various nucleotide sugars
tps01100  Metabolic pathways
tps01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:tps00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00051 Fructose and mannose metabolism
    THAPSDRAFT_40586 (GMD1)
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    THAPSDRAFT_40586 (GMD1)
Enzymes [BR:tps01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.47  GDP-mannose 4,6-dehydratase
     THAPSDRAFT_40586 (GMD1)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2
Other DBs
NCBI-GeneID: 7448453
NCBI-ProteinID: XP_002290502
JGI: 40586
UniProt: B8C1P6
LinkDB
Position
5:complement(154903..156857)
AA seq 361 aa
MSEGKVALITGITGQDGSYLTELLLSKGYTVHGIIRRSSSFNTGRIDHIYRDRHETGVKL
FLHYGDLCDATNLITIIANVKPDEIYNLGAMSHVKVSFDMPEYTADCDGVGVLRMLDAIR
ACGLEKSCRFYQASTSELYGKVQEVPQSETTPFYPRSPYAVAKQYAFWILVNYREAYGMH
LTNGILFNHESPRRGATFVTRKITIAVARITEGLDKCLYLGNIDAKRDWGHARDYVEGMW
RMLQHDTPDDYVLATGETHTVREFVEKAFAHAGTTIAWKGETGTVNEYGVDAADESRVLV
RIDPRYFRPTEVDLLLGDPSKAKKTLGWEATLGFEGLVKDMMTADLAMVRGETVDPDAPR
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtcagaaggcaaagtagcattaatcacaggaatcaccggtcaagatggatcatacttg
acggaactgttgttgtccaaggggtacactgtccacggaatcatccgtcgttcttcctcc
tttaacaccggccgtatcgatcatatctaccgtgatcgtcacgaaacgggcgtcaaacta
ttcctccactacggagatttgtgcgatgcaaccaatcttattacgattattgccaatgtc
aagcctgatgagatttataacttgggggcaatgagtcacgtgaaggtttcgtttgatatg
cctgagtacaccgccgactgcgacggtgtaggagtcctccgcatgctcgacgcgatccgt
gcttgtgggctcgaaaaatcatgccgtttctaccaagcctccacatccgaactatacggc
aaagttcaggaagttcctcaatcggaaaccactcccttctacccccgttctccctatgct
gtggcgaagcagtatgcattttggatcttagtgaattatcgtgaggcttatggaatgcac
cttaccaatggcattctgttcaatcacgagagtcctaggaggggagccacctttgtaacg
aggaagattacaatcgccgttgctcgtattaccgaaggattggataagtgcttgtatctc
ggtaacattgatgccaagcgtgattggggacatgcacgtgactacgtagaaggaatgtgg
aggatgcttcaacacgacacccccgacgattacgtccttgccactggtgagacgcacact
gtgagggagttcgtcgaaaaggcatttgctcatgcagggaccaccattgcttggaagggg
gagactggaacagtaaacgagtatggagttgatgctgccgatgaatcacgtgttttagtg
aggattgatcctcgttacttccgtcctacggaggtggatcttcttcttggggatccaagt
aaggcgaagaagacacttgggtgggaggcaactcttgggtttgagggattggtgaaggat
atgatgactgctgatttggccatggttaggggagagactgtggatcctgatgcgcctagg
ccctag

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