Thalassiosira pseudonana: THAPSDRAFT_40597
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Entry
THAPSDRAFT_40597 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPE65
Motif
Other DBs
NCBI-GeneID:
7447266
NCBI-ProteinID:
XP_002290057
JGI:
40597
UniProt:
B8C1R4
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Position
5:193775..195824
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AA seq
554 aa
AA seq
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MTAYANGYKTVFNEISCSLGEPSEGTLPSDLVGTYYRCGPAMFIDPTRMVLHPFEGDGAV
LATVDASGKVTTRFRYVRTNAFTNERKKGKKLYTGMESTRSMSSSSTVGNDLPLPFHRHH
LLPGLNKQRKNTSNTRTVYFGKKLLSLWSGGLPYKLDSLALSTDGRSQLGGVIKKEDSAL
GGKAAFDAKRNRMLFYGVDEESNASTLNLYEFNSKFQPITENDGVVQAKLPGLAMIYDFA
VTDNFAVFVQPVLKVNGMQYMLGKEPGKTISMEGEPSVSSTGISVCRNAGEIRTFQIPFD
GVDEANLQFINAYESDDGTIIFDAIRSDGSTKSGGGSNTKWPWASSLSDYRNMASKTSLW
RYKVHPQRGFISKDCLNNDQVYFGVVNPDASASVHRYVYAAAGATGSDVAPPQGIVKYDV
ESNTQERWFPQSYEFCGEPMYAKKQGDDSEDGGYILSVLFNGKEEKSEVIVLKATNISQG
PIARVPIGISVPHGYHGCFASGDEANWRHDEIERRAKLSDKMETRGSMWNEVKSDFSGLG
LRFDDMEEYFGDLM
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctatgctaacggatacaaaactgtcttcaatgagatatcgtgttcgcttggt
gaaccgtcggaggggacgttgccgagtgatttggtggggacgtattatcgttgtggtcct
gccatgtttatagaccccactcgtatggtattacaccccttcgaaggagatggtgcagtc
ttggcaacggtagatgcttctgggaaagtcaccacgagattcagatatgttcgtaccaat
gcctttacgaatgaaagaaagaagggaaagaagttgtatactggtatggagtctacgcga
tccatgtcatcatcatcgactgttggtaatgatttgccacttcctttccatcgacaccat
cttctccctggattgaacaaacaacgcaagaatacatccaacacacgaacagtctacttt
ggcaagaaactactatcactatggagtggaggattaccgtacaaactcgattcgttggcg
ttgtctaccgatggacgatcgcaactcgggggagttatcaagaaggaagatagcgccctg
ggcggaaaagcagcatttgacgctaaacgaaacagaatgctcttttacggagttgacgag
gaatcaaatgcatcaacactcaatctatatgaattcaactcaaagtttcaaccaatcact
gagaacgatggagtagtgcaagcgaagcttccgggcttggccatgatttatgattttgcc
gtgacagataactttgcagtgtttgtgcagcctgttttgaaggtgaatgggatgcagtat
atgttgggtaaggagccaggcaagactatatctatggagggagagccttcggtgagtagc
actggtatttcagtctgcaggaacgcaggagagatacgaacattccagattcctttcgac
ggtgttgacgaggcaaacttacaattcatcaatgcgtatgaaagtgatgacggaacaata
atctttgatgcaattcgttccgacggaagcacaaaaagtggtggtggttccaatacaaag
tggccatgggcgtcgtcactctcggattacagaaacatggcatcaaagacatcgctatgg
aggtacaaagtccatccgcagaggggtttcatctccaaagattgcttgaacaatgaccag
gtctactttggagttgttaaccccgatgcgagtgcaagtgtacatcgatacgtgtatgct
gctgcaggagcaacaggaagcgatgtggctccacctcagggcattgtcaaatacgacgtt
gagagcaatacgcaagaaaggtggttccctcagagttacgagttctgcggagagccaatg
tatgcaaagaagcaaggagatgactcggaagacggtggatacattctctctgtgctgttc
aatggaaaagaagaaaagagcgaagtaatcgtactgaaagcaaccaatatcagccaagga
cctatcgcacgagtacccattggaatatccgttcctcacggataccacggatgcttcgcc
tcgggagacgaagccaattggagacacgatgagattgaacgaagagcaaagctctctgac
aagatggagactagaggcagtatgtggaatgaagtcaagagcgatttctctggcttgggt
ttgaggtttgatgatatggaggagtactttggagaccttatgtga
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