Thalassiosira pseudonana: THAPSDRAFT_40627
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Entry
THAPSDRAFT_40627 CDS
T01078
Name
(RefSeq) phosphatase of serine threonine protein phosphatase
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps03015
mRNA surveillance pathway
tps04136
Autophagy - other
tps04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
THAPSDRAFT_40627
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
THAPSDRAFT_40627
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
THAPSDRAFT_40627
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tps01009
]
THAPSDRAFT_40627
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tps03019
]
THAPSDRAFT_40627
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_40627
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_40627
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_40627
Enzymes [BR:
tps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
THAPSDRAFT_40627
Protein phosphatases and associated proteins [BR:
tps01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
THAPSDRAFT_40627
Messenger RNA biogenesis [BR:
tps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
THAPSDRAFT_40627
Membrane trafficking [BR:
tps04131
]
Autophagy
Other autophagy associated proteins
Others
THAPSDRAFT_40627
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
THAPSDRAFT_40627
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THAPSDRAFT_40627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
7451729
NCBI-ProteinID:
XP_002290090
JGI:
40627
UniProt:
B8C1X5
LinkDB
All DBs
Position
5:338719..340535
Genome browser
AA seq
318 aa
AA seq
DB search
MPRPDVDQLDEQIDRLRSGGTLTENEVKVLCDKAKEILQEESNVQPVSAPVTVCGDIHGQ
FYDLAELFRIGGSCPESNYLFMGDYVDRGYYSLETVTLLVALKVRFRNRITILRGNHESR
QITQVYGFYDECLRKYGNANVWKHFTDTFDYLPMTAVVADRIFCLHGGLSPSIDTLDHAR
DLDRVQEVPHEGPMCDLVWSDPDDRCGWGISPRGAGYTFGQDITEQFTHINNLHFIARAH
QLVMEGYQWQHNRTVVTVFSAPNYCYRCGNQAAIMEVDDEVDHLDKDAIHDHIKFSQFDP
APRDESWHKSPRTPDYFL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaccggacgtagaccagctcgacgagcagatagacagactgcgcagtggtggg
acattgaccgagaatgaggtgaaggtgctgtgtgacaaggccaaagaaatcctccaagaa
gaatccaacgtccaacccgtctccgcccccgtcacagtctgcggcgacatccacggacaa
ttctacgacctcgccgaactgttccgcatcggcggctcctgccccgaatccaactacctc
ttcatgggagactacgtcgaccgcggctactactccctcgaaacggtcacgctcctcgtc
gccctcaaagtccgctttcgaaaccgcatcaccatcctccgcggcaatcacgaatcccga
cagattactcaagtgtacgggttttacgatgagtgtcttcgaaaatacgggaatgccaac
gtgtggaagcattttacggatacgtttgattatttgcccatgacggcggtggtggcggat
aggatcttttgtttgcatggggggttgagtccgagtattgatacgttggatcatgcgagg
gatttggatagggtgcaggaggtgccgcacgaggggcccatgtgtgatttggtttggagt
gatcccgatgataggtgcggctggggaatatccccccgaggcgcaggctacaccttcggc
caagacatcaccgaacaattcacccacatcaacaacctacacttcatcgctcgagcgcat
caactcgtcatggaggggtatcagtggcagcacaatcggactgtggtgacggtgttttcg
gctccgaattattgttataggtgtgggaatcaggcggcgattatggaggtggatgatgag
gtggatcatttggataaggatgctattcatgatcatatcaagttttctcaatttgaccca
gcaccacgggatgaaagctggcataagagtccacgaacacctgactacttcttgtag
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