Thalassiosira pseudonana: THAPSDRAFT_40871
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Entry
THAPSDRAFT_40871 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14521
N-acetyltransferase 10 [EC:2.3.1.-]
Organism
tps
Thalassiosira pseudonana
Pathway
tps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THAPSDRAFT_40871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_40871
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
90S particles
Other 90S particles
THAPSDRAFT_40871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GNAT_acetyltr_2
tRNA_bind_2
TmcA_N
Helicase_RecD
Acetyltransf_1
Acetyltransf_7
DpnII
Inhibitor_I36
Motif
Other DBs
NCBI-GeneID:
7446627
NCBI-ProteinID:
XP_002291291
JGI:
40871
UniProt:
B8C4V9
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All DBs
Position
6:complement(78735..82777)
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AA seq
1115 aa
AA seq
DB search
MVRKKLDERIRTLFSHCLRTNQRALLLLVGDHGKDQIPNLHQIMDRTANMSKSERLGSIN
NGNSSVLWCYKKELGFSTHRKKRMEKIKRDKKRGLAKSSSSNNAAATAAAEQMDNFELFL
NNTNITWCYYKDSHRVLGTTHSILVLQDFEALTPNIMARTIETVQGGGLVVFLLRTVKSL
RQLYAMTMDVHSRYRTESSGDVVPRFNERFILSLGGCANCLVCDDELNILPLSKKTLARL
TKMGTSPTAYDDDGEEQQQVVTYKTDDDVQLEQLKQTLQDTPHVGKLVELTKTLDQARAV
LTFLEASGKSTTVSLTAPRGRGKSAALGLCLAGAISFGFNSVVVTAPEPENLVSVFQFLI
EGLKALKYQEHYDYTIGYNYGMDSNEGNNRGEKAGRDNIKCIVSVEIHGRGTQRQTVRYV
KPSDVDKFVGAELVAVDEAAAIPLPIVRKLMQLTFLSSTINGYEGTGRALSLKLIKELRD
SNSKRRSGRWAAEAAAAKGAVSSSGSATGPLKELELSHPIRYALGDPVEKWLNNLLCLDY
TLALRGGAPAPAECELYHVNRDALFSYHRLSESFLQKLWGLYTSAHYKNTPNDLQMLSDA
PAHNVFVLLGPTAESDGDEDALPDILAIVQTSLEGKLSRKTIQAQLARGHRSAGDLIPWT
MSQQFGDGNFAQLSGARVVRVAVHPAVQGLGYGSRAMELLFRYYNGEMVSLNGGIEETSD
SENETPSESESEDEPASNALIHKEALKPRKKLPPLLLPLSTIPTPRLDWLGTSFGLTPSL
HNFWQRKVGMTLLYLRQTSNELTGEHSAIMIRALPRRSGWDDAWLPAFGVDARRRIGRLL
GGSFRGMDVSLAVSLMGDVAALQEVKKRSGTQSTKLTSSELHYHLTPHDLQRLELYSRNL
CDHHLVSDLIPSLSQLYFTSRMGHSFRLSSVQAALLCGLGLQQKSVEDLTKELGLPINQV
LAMFNKAVKKMSLAFNQILVEEESKSLLGGDAMRKAETKVNKMRDVVGQTLEEDADEGAA
VAMEALKKGNAENSRKSVIMKYALKGTDEEWATALKDKEGVDGATVQIKLKTPKKRKADG
GDVLESILKHEKEAQSGKKEKGGKKKSKKKSRKTM
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcaaaaagctagacgagcgaatccgcaccctcttctcccactgcctccgcacc
aaccaacgcgccctcctcctcctcgtaggcgaccacggcaaagaccaaatcccaaacctc
caccaaatcatggatcgcaccgccaacatgtccaaaagcgagcgcctcgggagcatcaac
aacggcaactcctccgtcttgtggtgctacaagaaggaacttgggtttagtacccatcgc
aagaagaggatggagaagattaaacgcgataagaagaggggacttgccaagagcagcagt
agtaacaacgctgccgctacggctgctgcggaacagatggacaactttgaattgttcttg
aacaataccaacattacgtggtgttattacaaagactcccatcgtgttctcggtacgaca
cactccatactcgtcctccaagactttgaagccttgactccaaacattatggcacggact
attgaaactgttcaggggggaggattggtggtgtttttgttgaggacggtcaagagtttg
agacagttgtatgcaatgacgatggatgtgcattcgagatataggacggagagtagtggg
gatgtggtgccgaggtttaatgagaggtttattttgagtttggggggttgcgccaattgt
ttagtgtgtgatgacgagctgaacatcctaccactatcgaaaaagacactggcacggctg
acaaagatgggaacgtctccaacagcatacgacgacgatggcgaagagcagcaacaggtt
gtcacgtacaaaactgacgacgatgtacagttggaacagctaaagcaaacacttcaagat
actccccacgtaggcaagttggtcgagctaacaaagactttggatcaggctcgtgcagtg
cttacgtttttggaggctagtggcaagtcaacgactgtttctttgactgctccgaggggg
cgtgggaaatctgctgctcttggattatgcctcgctggtgctatttcgtttgggttcaac
tccgttgttgtgacagctcccgagccagagaatcttgtctcggtgtttcagttcttgatt
gaggggttgaaggcactgaagtaccaagagcattatgattacacgattggatacaactac
gggatggatagtaacgaaggcaacaataggggagaaaaggctgggagggacaatatcaaa
tgcattgtatcggttgaaatccacggtagaggcactcagaggcaaacggtacgctatgtg
aagccatcggatgtggacaagtttgttggagccgagttggtggctgtggatgaggcagca
gcaatcccattgcctattgtgcggaagttgatgcagctcacgtttttgagttcaaccatc
aatggatacgagggaactggaagagcattgagtcttaagctcatcaaagagcttcgcgat
tccaattcaaagagacgtagtggacgatgggctgccgaagctgctgcagccaaaggtgca
gtgtcttcctcgggatctgccaccgggcctttgaaggagctggagctttcgcatcctatc
cgttatgcattaggagatccggtggagaagtggctcaataatcttctttgtttggattat
accctcgcgctccgaggaggggctccagcaccagccgaatgtgaactctatcatgtcaat
cgcgatgctctgttctcgtaccatcgtctatcggaatcgttcctccaaaagctgtggggt
ttgtacactagtgctcattacaagaacactccaaacgatttgcaaatgttgagtgatgca
cctgctcacaacgtgttcgtactattgggtccgacggctgaatccgacggcgatgaagat
gcacttccagacattctggccattgtgcagacgtctctagagggaaagttgagtcggaaa
actattcaagctcagttggccagaggtcatcgttctgctggcgatcttattccgtggacg
atgagtcagcagtttggcgatggtaactttgctcaattgagtggagcacgagtggtgagg
gtggcagtgcatccggctgtacagggacttggatatggaagccgtgcaatggaattgctg
tttaggtattacaacggagagatggttagtttgaatgggggtatcgaagaaacgagcgac
agtgagaacgagactccctcggaaagtgaaagcgaagacgagcctgcgagcaatgctctc
attcacaaggaggctctcaagcctcgtaagaaactgcctcctctactgctgcctctttcg
accattccaactccaaggcttgactggctcggtacatccttcggacttacaccttccctt
cacaacttttggcaacgcaaggttggcatgacattgctatacctccgccagacatcaaat
gaactgactggagaacactcagctattatgattcgtgccttgccgagacgaagtgggtgg
gatgatgcgtggttgcctgcgtttggtgtggatgcaagaaggaggattggaaggctgcta
ggtggatcgtttagggggatggatgttagtttggctgtgagtctgatgggagatgtcgct
gctctccaggaagtgaagaaacgctcgggtacccagtctaccaaactcacttcatctgaa
ctccactaccacctgactcctcacgatctccaacgtctcgagctttacagtcgaaatctg
tgcgaccaccaccttgtctcggatcttattccttctctatctcaactctacttcacgagt
cggatgggacacagctttcgcctgtcgagtgttcaagccgctcttctttgcggattggga
cttcagcagaagagcgtcgaagacttgacgaaggagttgggactccctattaaccaagtt
ctggcaatgttcaataaggcagtgaagaaaatgtctttggcgttcaatcagatactggtg
gaagaagagagcaagagtttgttgggtggagatgcgatgaggaaggcggagacgaaggtg
aataaaatgagggatgttgtaggacaaacattggaggaagatgctgacgagggtgcagca
gttgccatggaagctctgaagaagggcaacgcagagaatagcaggaagagtgttattatg
aagtatgctctcaaaggaaccgacgaggagtgggcaacagctctcaaagataaggaaggt
gtcgatggcgcaactgtccagatcaaattgaagactcctaagaagaggaaagctgacggt
ggtgatgtattggagagtattctcaagcacgaaaaggaagctcaatccggtaaaaaagag
aaaggtggtaagaagaagtcgaagaagaagtctcgcaagacaatgtag
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integrated database retrieval system