Thalassiosira pseudonana: THAPSDRAFT_40985
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Entry
THAPSDRAFT_40985 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14538
nuclear GTP-binding protein
Organism
tps
Thalassiosira pseudonana
Pathway
tps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THAPSDRAFT_40985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_40985
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
Pre-60S particles
GTPases
THAPSDRAFT_40985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GN3L_Grn1
MMR_HSR1
FeoB_N
RsgA_GTPase
GTP_EFTU
MCM
Arf
AAA_18
Motif
Other DBs
NCBI-GeneID:
7448593
NCBI-ProteinID:
XP_002291014
JGI:
40985
UniProt:
B8C5H8
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All DBs
Position
6:656381..658023
Genome browser
AA seq
513 aa
AA seq
DB search
MVKKKGKSKRITLKDKYKIQRRVVETHRKNRKQAKRDSAAGVVKHDKKKKDPGIPNSWPF
KQELLQDIRNSNERMEQRKLEEKERRAQLKKDPTSLSELVARANQKQSEFDARLGNNTAL
NNDDDAVRTTKESHGQQSRRAYLRELKKVIEASDVILQVLDARDPLGTRIHPAIEAGILS
HFDKRMVLVMNKIDLIPKNNVSEWLTYLRRSHPTVALKAGTTQSRSNESGKSGSVGQTKA
ESALSSSMAVGVDGLLQLLKNYARSSGESKKSKTCITVGIIGYPNVGKSSILNSLKRSRA
VGVSPRPGFTTTMQEVVLDKNVRLVDSPGVVFDDDDSKSGAGAILRNSVDADSISDPIPA
VEELLSRATMESLMMTYNVPAFPKGDVMTFLSMAARAKGKVLKGGVPDKIMAARLVLKDW
NKGKIPYFSSPPAEDSMDDDGESGTNKSAAKVVSSFSDEFDVSKIFEAHDAELMAGLEEK
DEMDFEGSDSDDDGMEEDENAEMEDADDFDFEE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaagaaggggaagtccaagcgaatcactctcaaagacaagtacaaaatccaa
cgccgcgtcgtagagacacatcgcaagaatcgcaagcaagccaaacgagactctgccgct
ggcgtcgtcaagcatgacaagaagaagaaagaccccggaattcccaactcgtggcccttt
aagcaggagttgctccaggatattcgtaattccaatgaacgtatggagcagaggaagttg
gaggagaaggaacgcagagctcagttgaagaaagatcctacatcgttgagtgagttggta
gcgcgggcaaatcaaaaacagtccgagtttgatgcgaggcttgggaataacacagcgctg
aacaacgatgatgatgccgttcgtaccaccaaagagtcgcatggacagcaatctcggcgt
gcctatcttcgtgagttgaagaaggtgatagaagcatccgatgtcattctccaagtactc
gatgcacgtgatcctctcggcacacgtattcatcctgccattgaagctgggatattatct
cactttgacaaacgcatggtactcgtcatgaacaaaattgacttgattcctaagaacaac
gtatcggagtggttgacgtacctccgtcgctcacatcctactgtggcactgaaagctggt
actacgcaatctcgttcaaatgagtctggcaagagtggtagcgtaggccaaaccaaggca
gagtctgccctttcgtcatccatggctgttggtgttgacgggcttcttcaactcttaaag
aactacgcacgttcttcgggtgaatccaaaaagtccaagacgtgcatcacagtgggcatc
attggctaccccaacgttggcaagtcgtccattctcaacagtctcaaacgttctcgtgct
gtgggtgtttctcctcgtccagggtttaccacaaccatgcaagaagttgtattggataag
aatgtccgtcttgtcgactctcctggagttgtctttgacgacgatgattccaaaagtggt
gctggagccattcttcgcaatagtgttgatgctgatagtatctcagatcctattcctgca
gtggaggagttgttatcacgtgcaactatggagagtttaatgatgacgtacaatgtacct
gcatttcctaaaggcgatgtcatgacgtttctgtccatggctgctcgtgcgaaaggaaag
gtattgaagggaggggttcccgataagatcatggcggctcgccttgtgttgaaggattgg
aacaagggtaagattccatacttttcatctcctcccgcagaagatagtatggatgacgat
ggtgagagtggaacaaacaagagtgcagccaaggtggtgtcctccttcagtgacgagttt
gacgtgagcaaaatctttgaagctcacgatgccgagttgatggcagggttggaggagaag
gacgagatggactttgagggtagtgattcggatgatgatggcatggaagaagatgagaat
gccgagatggaggatgctgatgatttcgactttgaagagtag
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