Thalassiosira pseudonana: THAPSDRAFT_42447
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Entry
THAPSDRAFT_42447 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14411
RNA-binding protein Musashi
Organism
tps
Thalassiosira pseudonana
Pathway
tps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
THAPSDRAFT_42447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tps03019
]
THAPSDRAFT_42447
Messenger RNA biogenesis [BR:
tps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
THAPSDRAFT_42447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SPAN
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
7451569
NCBI-ProteinID:
XP_002293976
JGI:
42447
UniProt:
B8CCP8
LinkDB
All DBs
Position
14:complement(774274..775101)
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AA seq
176 aa
AA seq
DB search
MSYYGNASATPSTAAAHLASNIDAAKIFVGGLSWQTTEETLRYHFEQYGEVSSVEVMRDR
NTGDPRGFAFVVFKSDETVELILNSGPQEINHKVVDIKRAQARGVAPPSIHGAEDASVSS
GGGQTNTRFKQEGNSLLSPEQLKNKIFVGGLPLHVDKDGMKDFFSVFGVVTDAIVM
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactacggcaacgcatccgccacaccctccaccgccgccgcccacctggcatcc
aacatcgacgctgccaaaatcttcgtaggcggtctctcctggcagactaccgaagaaaca
ctccgttatcactttgagcaatacggagaagtgtcatcagtggaagttatgagagatagg
aatacgggtgatcctaggggctttgcgtttgtggttttcaagagtgatgagacggtagag
ttgatattgaatagtggacctcaggagattaaccacaaggttgtggatattaagagggcg
caggctaggggtgtggcacctccaagcattcacggagcagaggacgccagcgtaagcagc
ggaggaggacaaacgaatactcgcttcaagcaagaaggcaactccctcctctcccccgaa
caactcaaaaacaaaatctttgttggaggtcttcccttgcacgtagacaaggatggaatg
aaagacttcttctccgtctttggtgtagttactgatgctattgtcatg
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