Thalassiosira pseudonana: THAPSDRAFT_42594
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Entry
THAPSDRAFT_42594 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14815
mRNA turnover protein 4
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_42594
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
THAPSDRAFT_42594
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L10
RL10P_insert
RlmL_1st
Motif
Other DBs
NCBI-GeneID:
7442546
NCBI-ProteinID:
XP_002296819
JGI:
42594
UniProt:
B8LCP9
LinkDB
All DBs
Position
16
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AA seq
220 aa
AA seq
DB search
MPKSRRAQRVALTKTAKKTREHKSNYVDTVRSAIDSNDRLYLFSYENMRSNHFKDVRLHF
RGRLFLGKNKLLQIALGRSSEDEYSDNLHQLSKILSGSVGILCTSQSPKDVESYFANLAV
EDFARAGQTAPQTVMLSQSQIETHPVSMVEQFRKLGLPVEVKNGRVAFVGGREEWEVCKE
GKELSVEQCKILTHMGLKLAVFRIELVCRWEKEEGTVEEF
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtcaagaagagcgcaaagagtggcactcacgaaaacagccaaaaagacacga
gagcacaaatccaactacgttgacacagtccgctcggccattgattccaatgatcgccta
tacctcttttcatacgagaatatgaggagtaaccacttcaaagatgtgagattgcacttt
cgaggacgattgttcttggggaagaacaagttacttcaaatagcactcggtcggtcttcc
gaggatgaatactcggataacctccatcaactatccaagatactatcgggaagtgttggt
atcctttgcacaagtcaatctcccaaagatgtggaatcatactttgccaaccttgccgtg
gaagactttgcacgagcaggccaaactgccccccaaacagtcatgctttcccaatcacag
attgaaacccaccctgttagcatggtggaacaattccgtaagcttgggcttccagtagaa
gtgaagaatggacgagtggcatttgttgggggtagggaggaatgggaagtttgtaaggag
gggaaggagttgagtgtggagcagtgtaagattttgactcatatggggctgaagttggct
gtgtttaggattgagttggtttgtaggtgggagaaggaggaaggaacggtggaggagttt
taa
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