Thalassiosira pseudonana: THAPSDRAFT_4576
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Entry
THAPSDRAFT_4576 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tps02000
]
THAPSDRAFT_4576
Transporters [BR:
tps02000
]
Solute carrier family (SLC)
SLC47: Multidrug and toxin extrusion (MATE) family
THAPSDRAFT_4576
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Gene cluster
GFIT
Motif
Pfam:
MatE
Polysacc_synt
Motif
Other DBs
NCBI-GeneID:
7448818
NCBI-ProteinID:
XP_002289847
JGI:
4576
UniProt:
B8BZP1
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Position
4:complement(<1384580..>1386394)
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AA seq
547 aa
AA seq
DB search
MRGHLLLLLIPAAHALVGVRPLPQFPLISLSVKIKQPSSTWRASADADSVAEFDVDGRLS
SWARLVSSIPKLKRKEASSRRLTFDDLDRKILSTAVPTMLNMMVVPLVNSVDTFWVGRIG
DPKALAAMSAANQCFFTIYFLAAFLPTITSPLVAEAIGRKDWDGARERVCDSLFLSNVLG
GLFCGILIAFPRAVLRMVLPDTLSDAVEGTMNVVDYAVPYLRWRSLGMVPALFSATGFAA
YRGLLNTVTPLKVSLFTNMLNLILDPIFIFGGVGKTAISTAWKGLGACGAAAATSIAEMT
SSVIYLRLLIRRKLIQWSKLFQPPSMTSLLPLIKGGAAMLLRQATLNVAFVSAARRAQIM
DPSGVSAAAYGITMQIYSLGVVAHLGVQGTAAALVPSSRAVGGDDAAREVADRIFAWGSI
LGVVLALVQWFALPVVTQFFSPLPEVRQAVRGPAMISSFIHLVNGLVFAGEGVLLGLGSF
KDLALITLLGVAAMISCLMSPLGNSLNGVLISLAAFNLVQGLAVTLHHVRFSPLRRRGFK
LFSAQKQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagagggcaccttctcctcctgttgattccggcggcccacgctttggtcggcgtacga
ccgctgccacagttccctctgatatcgttgtcggtgaagatcaagcagccctcgtcaaca
tggagagcatccgctgacgctgactccgtcgcagaatttgatgtcgacgggagactttct
tcttgggcacgtcttgtatcgtccattccgaagctcaaacgaaaagaggcatccagtaga
aggcttacttttgacgatctcgacaggaaaatcctatctaccgcagtgccaacgatgctc
aacatgatggtagttcctctcgtgaacagcgtcgatacgttctgggttgggcgaatcggt
gatccaaaggcattggctgcgatgagcgccgcgaatcaatgcttcttcacgatatacttc
ttggccgccttcctccccaccatcacgtctcctttggttgcagaggcgataggccgaaaa
gactgggatggtgcacgagaacgagtttgtgatagcttgttcttaagcaatgtattgggg
ggattgttctgcgggatattgatcgcgtttccaagagcagttctacgaatggtattgcca
gatacgttgtcagatgcagtagagggaacgatgaacgtggttgattatgctgttccttac
ttgagatggagatcgttgggaatggtacctgcactcttttcagccacaggatttgccgcc
taccgggggttgttgaatacggttacgccactcaaggtatctctcttcacaaacatgctc
aatctcattttggatccaatcttcatctttgggggagttggtaaaactgctatttcgacg
gcatggaagggcttgggagcatgtggagctgctgccgcaacgtctatagcagaaatgaca
tcttccgtcatttatctacggctccttattcggcgaaaactcatccaatggtcaaagttg
tttcaaccaccatcaatgacatctctattgcctttgatcaaaggaggtgctgcaatgctt
ctccgccaagccactctgaatgtagcctttgtttctgctgccagaagggcccaaatcatg
gatccgagcggagtatctgcagcggcgtatggcataacaatgcaaatctacagcctggga
gtagtagcacatctcggtgtacagggaacagctgctgcgcttgtgccttcgtcgagagct
gtgggcggggatgacgcggcgagagaagttgccgatcgtatcttcgcatggggtagtatt
ctgggagttgtcttggcattggtgcagtggtttgctttgcccgttgtaacgcagttcttc
tcgccactacctgaagtgaggcaggctgtcagagggccagcaatgatctcttcgtttatc
catttggtcaacgggttggtgtttgccggggaaggagtcctgctgggtctaggctcattc
aaagatttagcgttgatcacattgttgggagtcgctgcaatgatctcttgtttgatgtcg
cctcttggcaatagcttgaacggcgtgttgatcagcttagctgccttcaacttggtacaa
ggattggctgtcactttgcatcacgtacgcttttcacctctgagacgacgcgggttcaag
ctgtttagtgcacaaaaacaataa
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