Thalassiosira pseudonana: THAPSDRAFT_517
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Entry
THAPSDRAFT_517 CDS
T01078
Symbol
PSA1
Name
(RefSeq) 20S proteasome subunit alpha type 1
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
THAPSDRAFT_517 (PSA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tps01002
]
THAPSDRAFT_517 (PSA1)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tps03051
]
THAPSDRAFT_517 (PSA1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_517 (PSA1)
Enzymes [BR:
tps01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
THAPSDRAFT_517 (PSA1)
Peptidases and inhibitors [BR:
tps01002
]
Threonine peptidases
Family T1: proteasome family
THAPSDRAFT_517 (PSA1)
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
THAPSDRAFT_517 (PSA1)
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THAPSDRAFT_517 (PSA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
DUF1572
Motif
Other DBs
NCBI-GeneID:
7448604
NCBI-ProteinID:
XP_002291026
JGI:
517
UniProt:
B8C5K1
LinkDB
All DBs
Position
6:708902..710215
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AA seq
272 aa
AA seq
DB search
MFRNMYDTDVTVWSPEGRLLQVEYAMESVKQGSACIALRSSTHSVIGALKRSVSELSAHQ
QKILEIDDHLGIGIAGLTADARTLAKWMRNECLNHKYVYGTAIPSGRLVNDLADRHQRTT
QTYVRRPYGVGLLVASFDKNGPHVYQTCPSGNVYECYGSAIGARSQSGRTYLEKHSDSFP
SCTRDDLIMHALKALVGCVSGDGELTKENGCVAVVGKGEKFTLIEGEELQPYLDRLDLVP
PSLQYPSQKTSQLLIRIHNTIPIIITILLDIP
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtaatatgtatgataccgacgtgacggtgtggagtccggagggtcgcttgctt
caggtcgaatacgccatggaatccgtcaaacaaggatccgcatgcatcgccctccgctcc
tccacccactccgtcatcggcgcactcaaacgttccgtctccgaactatccgcacaccaa
cagaagattctcgaaatcgacgaccacctcggcatcggcatcgcaggcctcaccgccgac
gcccgaactcttgccaaatggatgagaaacgaatgcttgaatcacaagtacgtctacggt
accgccatccccagcggacgcctggtgaacgatttggccgatcgccatcagaggacgacc
caaacctacgtccgacgtccctacggagtaggactcctcgttgcctccttcgacaaaaac
ggcccccacgtctaccaaacatgtccctccggaaacgtctacgaatgctacggctctgcc
atcggagcccgctcccaatccggacgaacctacctcgagaaacattccgactcttttccc
tcctgtacgcgcgatgatttgatcatgcatgcgctcaaagcgttggtggggtgtgtgagt
ggggatggagagttgacgaaggagaatggatgtgtggctgtggtggggaagggggagaag
tttacgttgattgagggggaggagttgcagccatatttggatagattggacctcgttccg
cccagcttacaataccccagccaaaagacgagccagcttcttatcaggatccataacacc
atccccatcatcatcactatcctcctcgacatcccttga
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